Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MTND3P5-201ENST00000512798 333 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.97□□□□□ -2.09
SRP54P61011 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 AC007375.1-201ENST00000554513 578 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AC015712.3-201ENST00000559380 164 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.97□□□□□ -2.09
SRP54P61011 AC006362.1-201ENST00000567392 174 ntBASIC1.97□□□□□ -2.09
SRP54P61011 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 AC104073.3-201ENST00000610942 955 ntBASIC1.97□□□□□ -2.09
SRP54P61011 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.97□□□□□ -2.09
SRP54P61011 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
SRP54P61011 RNA5SP276-201ENST00000362580 94 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNORD116-9-201ENST00000384000 95 ntBASIC1.96□□□□□ -2.1
SRP54P61011 RNU6-142P-201ENST00000384019 107 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNORD116-3-201ENST00000384287 95 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNORD116-7-201ENST00000384404 95 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNORD116-5-201ENST00000384462 95 ntBASIC1.96□□□□□ -2.1
SRP54P61011 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC068050.1-201ENST00000394891 380 ntBASIC1.96□□□□□ -2.1
SRP54P61011 RN7SKP61-201ENST00000410642 295 ntBASIC1.96□□□□□ -2.1
SRP54P61011 VN1R108P-201ENST00000431580 830 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNAP23P1-201ENST00000433229 246 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP54P61011 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AL031274.1-201ENST00000450334 232 ntBASIC1.96□□□□□ -2.1
SRP54P61011 MTCO2P18-201ENST00000457151 658 ntBASIC1.96□□□□□ -2.1
SRP54P61011 PMCHL2-203ENST00000457791 237 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP54P61011 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
SRP54P61011 RNU6-965P-201ENST00000516721 96 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC107304.1-201ENST00000604229 296 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC007684.1-201ENST00000609671 477 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC063943.3-201ENST00000615562 356 ntBASIC1.96□□□□□ -2.1
SRP54P61011 uc_338.34-201ENST00000617467 174 ntBASIC1.96□□□□□ -2.1
SRP54P61011 AC022079.1-201ENST00000621546 602 ntBASIC1.96□□□□□ -2.1
SRP54P61011 SNORD98-201ENST00000636377 67 ntBASIC1.96□□□□□ -2.1
SRP54P61011 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
SRP54P61011 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RNU6-827P-201ENST00000365553 106 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RNU6-1158P-201ENST00000391167 107 ntBASIC1.95□□□□□ -2.1
SRP54P61011 BTF3L4P2-201ENST00000392798 346 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP54P61011 AC078809.1-201ENST00000427601 140 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC010975.2-201ENST00000427781 588 ntBASIC1.95□□□□□ -2.1
SRP54P61011 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.95□□□□□ -2.1
SRP54P61011 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.95□□□□□ -2.1
SRP54P61011 HMGB3P17-201ENST00000504195 649 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP54P61011 AK3P2-201ENST00000507976 429 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC009646.1-201ENST00000510455 318 ntBASIC1.95□□□□□ -2.1
SRP54P61011 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP54P61011 RNU6-237P-201ENST00000515985 71 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RNU6-295P-201ENST00000516901 104 ntBASIC1.95□□□□□ -2.1
SRP54P61011 MTND2P38-201ENST00000522536 667 ntBASIC1.95□□□□□ -2.1
SRP54P61011 MTND4P7-201ENST00000523876 130 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AP003034.1-201ENST00000534621 422 ntBASIC1.95□□□□□ -2.1
SRP54P61011 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP54P61011 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP54P61011 AC090115.3-201ENST00000553218 849 ntBASIC1.95□□□□□ -2.1
SRP54P61011 TRAV32-201ENST00000553993 340 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP54P61011 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP54P61011 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP54P61011 MIR5583-1-201ENST00000580941 59 ntBASIC1.95□□□□□ -2.1
SRP54P61011 MIR4769-201ENST00000584126 77 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC012507.3-201ENST00000603556 477 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC009314.1-201ENST00000603871 304 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC005034.5-201ENST00000604219 466 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AC025754.2-201ENST00000606491 432 ntBASIC1.95□□□□□ -2.1
SRP54P61011 RN7SKP299-201ENST00000606679 301 ntBASIC1.95□□□□□ -2.1
SRP54P61011 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
SRP54P61011 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SRP54P61011 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP54P61011 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 SNORD115-3-201ENST00000363100 82 ntBASIC1.94□□□□□ -2.1
SRP54P61011 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
SRP54P61011 SNORD32B-201ENST00000364460 84 ntBASIC1.94□□□□□ -2.1
SRP54P61011 Y_RNA.255-201ENST00000364581 97 ntBASIC1.94□□□□□ -2.1
SRP54P61011 SNORD32A-201ENST00000364805 84 ntBASIC1.94□□□□□ -2.1
SRP54P61011 Y_RNA.359-201ENST00000365498 102 ntBASIC1.94□□□□□ -2.1
SRP54P61011 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
SRP54P61011 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
SRP54P61011 MIR1283-2-201ENST00000408621 87 ntBASIC1.94□□□□□ -2.1
SRP54P61011 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.94□□□□□ -2.1
SRP54P61011 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.94□□□□□ -2.1
SRP54P61011 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.94□□□□□ -2.1
SRP54P61011 AC244670.1-201ENST00000436879 112 ntBASIC1.94□□□□□ -2.1
SRP54P61011 AL451074.3-201ENST00000437709 472 ntBASIC1.94□□□□□ -2.1
SRP54P61011 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
SRP54P61011 AC132942.1-201ENST00000486753 483 ntBASIC1.94□□□□□ -2.1
SRP54P61011 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.94□□□□□ -2.1
SRP54P61011 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms