Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ISCA1P6-201ENST00000427740 390 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AL596276.1-201ENST00000434465 418 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AL022238.1-201ENST00000442557 355 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
EIF3EP60228 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
EIF3EP60228 ART2BP-201ENST00000453501 499 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.43□□□□□ -2.18
EIF3EP60228 MTCO2P6-201ENST00000463134 685 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AC087477.1-201ENST00000465747 340 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 MTND3P5-201ENST00000512798 333 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 RNU6-377P-201ENST00000515965 102 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 RNU6-1178P-201ENST00000516674 107 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 RNU6-548P-201ENST00000517083 115 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
EIF3EP60228 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.43□□□□□ -2.18
EIF3EP60228 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.43□□□□□ -2.18
EIF3EP60228 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.43□□□□□ -2.18
EIF3EP60228 BNIP3P16-201ENST00000589779 534 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.43□□□□□ -2.18
EIF3EP60228 AL360219.1-201ENST00000610230 366 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
EIF3EP60228 AC122133.1-201ENST00000613964 233 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AP001506.1-201ENST00000615444 211 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AL590240.4-201ENST00000616908 390 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AF246928.1-201ENST00000623768 87 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
EIF3EP60228 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
EIF3EP60228 RNU4-21P-201ENST00000362802 126 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RNU6-414P-201ENST00000363705 104 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RNU6-142P-201ENST00000384019 107 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RNU6-43P-201ENST00000384302 107 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RNU6-692P-201ENST00000384496 107 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 SNORA12-201ENST00000391162 147 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RPL31P35-201ENST00000431058 377 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AL121890.1-201ENST00000435457 205 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.42□□□□□ -2.18
EIF3EP60228 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.42□□□□□ -2.18
EIF3EP60228 HMGN2P18-201ENST00000450680 270 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 RNU7-182P-201ENST00000459009 62 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AC145146.1-201ENST00000496370 254 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.42□□□□□ -2.18
EIF3EP60228 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.42□□□□□ -2.18
EIF3EP60228 SNORA31.17-201ENST00000516953 127 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AC109479.2-201ENST00000517842 174 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.42□□□□□ -2.18
EIF3EP60228 MTND1P24-201ENST00000552175 861 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 SUB1P4-201ENST00000566062 339 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 MIR3136-201ENST00000583498 78 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 SNORD98-201ENST00000636377 67 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.42□□□□□ -2.18
EIF3EP60228 AP000560.1-201ENST00000624150 1937 ntBASIC1.42□□□□□ -2.18
EIF3EP60228 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-1141P-201ENST00000364520 107 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-336P-201ENST00000364891 107 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-1029P-201ENST00000384109 107 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-439P-201ENST00000384188 106 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-297P-201ENST00000384636 107 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 MIR1-2-201ENST00000384961 85 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 SNORA40.3-201ENST00000390964 122 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU4-46P-201ENST00000410818 138 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-1245P-201ENST00000411130 106 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNU6-293P-201ENST00000411259 106 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 AL033528.1-201ENST00000453780 140 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 MIR449C-201ENST00000516047 92 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RN7SKP287-201ENST00000516546 266 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 RNA5SP490-201ENST00000517141 136 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 AP001893.2-201ENST00000526949 202 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 VN1R107P-201ENST00000601784 209 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 AL391262.2-201ENST00000622466 494 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 SEPT14P19-203ENST00000633205 211 ntBASIC1.41□□□□□ -2.18
EIF3EP60228 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
EIF3EP60228 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.41□□□□□ -2.18
EIF3EP60228 MIR340-201ENST00000362125 95 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 RNU6-428P-201ENST00000362942 107 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 U3.4-201ENST00000363352 213 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 RPS29P13-201ENST00000402041 169 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 MTCYBP2-201ENST00000407745 171 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 MIR1267-201ENST00000408723 78 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.4□□□□□ -2.19
EIF3EP60228 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.4□□□□□ -2.19
EIF3EP60228 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.4□□□□□ -2.19
EIF3EP60228 RNU1-131P-201ENST00000458943 161 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 SNORD42A-201ENST00000459584 64 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 AC010409.1-201ENST00000487382 476 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.4□□□□□ -2.19
EIF3EP60228 HMGN1P13-201ENST00000505795 138 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.4□□□□□ -2.19
EIF3EP60228 MTCO3P7-201ENST00000510008 774 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 RNA5SP503-201ENST00000517047 117 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
EIF3EP60228 MIR3915-201ENST00000578518 97 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms