Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN1P58418 LINC02555-201ENST00000563933 1951 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN1P58418 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN1P58418 snoU2_19.2-201ENST00000363024 80 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CLRN1P58418 RNU6-281P-201ENST00000384212 103 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 MIR147B-201ENST00000390185 80 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 U3.19-201ENST00000390893 196 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 Z98941.1-201ENST00000407764 100 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 RN7SKP27-201ENST00000410684 333 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 RNU6-1203P-201ENST00000410703 110 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AC096649.2-201ENST00000416186 393 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.09□□□□□ -1.91
CLRN1P58418 AL358075.3-201ENST00000426289 226 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 ARL5AP4-201ENST00000430731 512 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AL441985.1-201ENST00000457727 251 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 RN7SL330P-201ENST00000469709 307 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AC023632.4-201ENST00000517783 191 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.09□□□□□ -1.91
CLRN1P58418 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.09□□□□□ -1.91
CLRN1P58418 AC025281.1-201ENST00000567026 265 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 MIR4425-201ENST00000580572 84 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 MIR3128-201ENST00000581957 66 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 RPS15AP11-201ENST00000594193 385 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.09□□□□□ -1.91
CLRN1P58418 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 CR392039.5-201ENST00000623201 510 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
CLRN1P58418 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
CLRN1P58418 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.09□□□□□ -1.91
CLRN1P58418 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.09□□□□□ -1.92
CLRN1P58418 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.92
CLRN1P58418 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.92
CLRN1P58418 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLRN1P58418 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CLRN1P58418 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN1P58418 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN1P58418 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN1P58418 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN1P58418 RNA5SP124-201ENST00000362739 110 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 RNU6-529P-201ENST00000363383 104 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 RNU6-137P-201ENST00000363680 108 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.08□□□□□ -1.92
CLRN1P58418 Y_RNA.477-201ENST00000384352 108 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 Y_RNA.562-201ENST00000384695 113 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 RNU6-1001P-201ENST00000411265 100 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 AL365496.1-201ENST00000426885 215 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 RPL39P38-201ENST00000467018 153 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.08□□□□□ -1.92
CLRN1P58418 RNU6-1198P-201ENST00000516904 67 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 AL391813.1-201ENST00000603098 260 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 RNU6-91P-201ENST00000607774 107 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 SDR42E1P4-201ENST00000620894 481 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN1P58418 AL034408.1-202ENST00000636088 415 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 SNORD98-201ENST00000636377 67 ntBASIC3.08□□□□□ -1.92
CLRN1P58418 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN1P58418 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN1P58418 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLRN1P58418 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLRN1P58418 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLRN1P58418 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLRN1P58418 SNORD115-8-201ENST00000363856 82 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 SNORD115-38-201ENST00000365037 82 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 RNU6-937P-201ENST00000384325 106 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 Y_RNA.518-201ENST00000384552 113 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 RNU6-1093P-201ENST00000391194 107 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 MRPL35P1-201ENST00000404272 572 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 SNORD12B-201ENST00000410433 91 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 CYCSP48-201ENST00000417124 323 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AC096920.1-201ENST00000423991 241 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 CYCSP4-201ENST00000429682 331 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 SETP5-201ENST00000437270 562 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AL133547.1-201ENST00000448546 220 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.07□□□□□ -1.92
CLRN1P58418 GZMAP1-201ENST00000503054 631 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AC107222.1-201ENST00000510899 637 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 RNU5F-2P-201ENST00000516066 82 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AC069200.1-201ENST00000609511 323 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AP001282.2-201ENST00000616149 309 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AC078938.1-201ENST00000620993 318 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.07□□□□□ -1.92
CLRN1P58418 AL161912.2-201ENST00000565707 3007 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 AL079305.1-201ENST00000623159 3008 ntBASIC3.07□□□□□ -1.92
CLRN1P58418 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLRN1P58418 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLRN1P58418 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLRN1P58418 Y_RNA.40-201ENST00000362645 93 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 Y_RNA.60-201ENST00000362831 98 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 Y_RNA.257-201ENST00000364596 102 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 MIR184-201ENST00000384962 84 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 MIR218-2-201ENST00000385006 110 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 RPS26P42-201ENST00000413485 326 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 AC126124.2-201ENST00000413542 321 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms