Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL591043.1-201ENST00000432461 424 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC4P56524 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC4P56524 AC133134.1-201ENST00000466800 359 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AK3P2-201ENST00000507976 429 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AC023141.11-201ENST00000508864 202 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC4P56524 RNU1-104P-201ENST00000517280 175 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 IMMP1LP2-201ENST00000552954 492 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC4P56524 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.75□□□□□ -1.97
HDAC4P56524 AL161423.1-201ENST00000613700 262 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.75□□□□□ -1.97
HDAC4P56524 MIR7157-201ENST00000635801 60 ntBASIC2.75□□□□□ -1.97
HDAC4P56524 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HDAC4P56524 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
HDAC4P56524 MTND4P23-201ENST00000447723 1363 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 MTND4P27-201ENST00000450813 1354 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 SNORD62.1-201ENST00000362541 86 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 RNU4-79P-201ENST00000362764 141 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 RNU6-1317P-201ENST00000364582 104 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 Y_RNA.473-201ENST00000384333 102 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 RNU6-306P-201ENST00000384617 107 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 RNU6-1328P-201ENST00000410938 106 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC074117.2-201ENST00000417130 397 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 NCOR1P3-201ENST00000420479 303 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.74□□□□□ -1.97
HDAC4P56524 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC4P56524 AC007969.2-201ENST00000441891 191 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC124916.1-201ENST00000444020 547 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC107399.1-201ENST00000451226 265 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 RPS29P27-201ENST00000463711 170 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 TRBV12-1-201ENST00000479785 344 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.74□□□□□ -1.97
HDAC4P56524 RNU5B-3P-201ENST00000516601 115 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.74□□□□□ -1.97
HDAC4P56524 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
HDAC4P56524 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 AC113139.1-201ENST00000605049 239 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HDAC4P56524 AL133215.3-201ENST00000609801 448 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 AL359314.1-201ENST00000616913 261 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.74□□□□□ -1.97
HDAC4P56524 AP006437.1-201ENST00000641440 3685 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HDAC4P56524 Z82209.1-201ENST00000422141 2135 ntBASIC2.74□□□□□ -1.97
HDAC4P56524 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HDAC4P56524 SNORD56.1-201ENST00000362913 68 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 RNU6-1059P-201ENST00000363752 98 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 SNORA67.1-201ENST00000364749 141 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 RNU6-622P-201ENST00000384272 103 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 SNORD116-29-201ENST00000384516 83 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 MIR218-1-201ENST00000384999 110 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HDAC4P56524 RNU2-52P-201ENST00000410680 190 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 RNU6-1245P-201ENST00000411130 106 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC4P56524 RPL37P10-201ENST00000412884 288 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AL139396.1-201ENST00000421137 167 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC4P56524 CR769767.1-201ENST00000436337 346 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC4P56524 AC011816.1-201ENST00000441346 546 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 RNU6-1037P-201ENST00000459571 107 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.73□□□□□ -1.97
HDAC4P56524 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC4P56524 AC026782.1-201ENST00000512952 449 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC4P56524 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC4P56524 AP002770.2-201ENST00000543613 532 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC4P56524 VN1R107P-201ENST00000601784 209 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 MIR6128-201ENST00000615528 109 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC098657.3-201ENST00000620434 263 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HDAC4P56524 AL359854.1-201ENST00000614203 1594 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HDAC4P56524 AL109809.4-201ENST00000603520 2185 ntBASIC2.73□□□□□ -1.97
HDAC4P56524 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC4P56524 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 Y_RNA.67-201ENST00000362870 100 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNU6-692P-201ENST00000384496 107 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 MIR517A-201ENST00000385001 87 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNU6-1140P-201ENST00000410517 106 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNU6-1304P-201ENST00000411374 106 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC4P56524 Y_RNA.632-201ENST00000459189 102 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms