Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC073648.5-201ENST00000603502 305 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC107304.1-201ENST00000604229 296 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 SNORD98-201ENST00000636377 67 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
PKNOX1P55347 SNORD32B-201ENST00000364460 84 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 Y_RNA.359-201ENST00000365498 102 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 RNU6-827P-201ENST00000365553 106 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 Y_RNA.381-201ENST00000365666 102 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 RNU5A-6P-201ENST00000384136 116 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 SNORA12-201ENST00000391162 147 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 RNU6-1158P-201ENST00000391167 107 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 BTF3L4P2-201ENST00000392798 346 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX1P55347 AC010975.2-201ENST00000427781 588 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AC073464.1-201ENST00000429823 534 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 MTCO2P16-201ENST00000436962 677 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 RPL32P28-201ENST00000443577 397 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AL031274.1-201ENST00000450334 232 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.65□□□□□ -2.15
PKNOX1P55347 TPT1P7-201ENST00000458300 517 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 RPS29P21-201ENST00000496272 170 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AC093259.1-201ENST00000509755 300 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AC079140.3-201ENST00000511111 550 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 MTND3P5-201ENST00000512798 333 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 SNORA31.16-201ENST00000516773 139 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AC103996.1-201ENST00000555468 102 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.65□□□□□ -2.15
PKNOX1P55347 AC006362.1-201ENST00000567392 174 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 VN1R107P-201ENST00000601784 209 ntBASIC1.65□□□□□ -2.15
PKNOX1P55347 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PKNOX1P55347 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
PKNOX1P55347 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PKNOX1P55347 RNU6-1141P-201ENST00000364520 107 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 RNU6-996P-201ENST00000365438 107 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 RN7SKP284-201ENST00000411002 343 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 CDK8P2-201ENST00000415020 547 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.64□□□□□ -2.15
PKNOX1P55347 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AL360221.1-201ENST00000445989 335 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.64□□□□□ -2.15
PKNOX1P55347 SNRPGP7-201ENST00000469016 106 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC022447.4-201ENST00000504053 364 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AC108078.1-201ENST00000508073 725 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC091133.4-201ENST00000511142 308 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 RNU6-991P-201ENST00000516168 107 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC090115.3-201ENST00000553218 849 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 HSBP1P1-201ENST00000555205 166 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC103987.3-201ENST00000582071 292 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AC025811.1-201ENST00000604312 472 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AC090582.1-201ENST00000636321 199 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
PKNOX1P55347 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PKNOX1P55347 AP000560.1-201ENST00000624150 1937 ntBASIC1.64□□□□□ -2.15
PKNOX1P55347 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PKNOX1P55347 SNORD114-1-201ENST00000362705 72 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
PKNOX1P55347 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 DEFB108C-201ENST00000400154 252 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 RNU4-26P-201ENST00000410270 107 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
PKNOX1P55347 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.63□□□□□ -2.15
PKNOX1P55347 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.63□□□□□ -2.15
PKNOX1P55347 AC002486.1-201ENST00000435098 391 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.63□□□□□ -2.15
PKNOX1P55347 AC098826.2-201ENST00000452011 651 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AL163973.1-201ENST00000484753 577 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 HMGB1P29-201ENST00000505659 499 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AC091874.1-201ENST00000511402 339 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 RN7SKP298-201ENST00000515950 94 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 MIR449C-201ENST00000516047 92 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX1P55347 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX1P55347 TRAV32-201ENST00000553993 340 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.63□□□□□ -2.15
PKNOX1P55347 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 MIR4424-201ENST00000585257 86 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.63□□□□□ -2.15
PKNOX1P55347 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 HULC.1-201ENST00000612720 240 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 uc_338.34-201ENST00000617467 174 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
PKNOX1P55347 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PKNOX1P55347 MTND4P14-201ENST00000435799 1354 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 Y_RNA.99-201ENST00000363138 105 ntBASIC1.62□□□□□ -2.15
PKNOX1P55347 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms