Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.04□□□□□ -2.08
SMSP52788 AC024909.2-201ENST00000553035 286 ntBASIC2.04□□□□□ -2.08
SMSP52788 MTND1P15-201ENST00000579262 949 ntBASIC2.04□□□□□ -2.08
SMSP52788 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.04□□□□□ -2.08
SMSP52788 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 SNORA26.3-201ENST00000391119 136 ntBASIC2.03□□□□□ -2.08
SMSP52788 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMSP52788 AL590556.1-201ENST00000423231 483 ntBASIC2.03□□□□□ -2.08
SMSP52788 AL133396.1-201ENST00000432048 687 ntBASIC2.03□□□□□ -2.08
SMSP52788 MTCO2P3-201ENST00000442543 421 ntBASIC2.03□□□□□ -2.08
SMSP52788 RNU7-138P-201ENST00000459479 64 ntBASIC2.03□□□□□ -2.08
SMSP52788 MTCO3P38-201ENST00000468910 766 ntBASIC2.03□□□□□ -2.08
SMSP52788 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 AC091885.1-201ENST00000506658 268 ntBASIC2.03□□□□□ -2.08
SMSP52788 MTND3P5-201ENST00000512798 333 ntBASIC2.03□□□□□ -2.08
SMSP52788 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 SNORA14.1-201ENST00000516113 141 ntBASIC2.03□□□□□ -2.08
SMSP52788 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 AC007375.1-201ENST00000554513 578 ntBASIC2.03□□□□□ -2.08
SMSP52788 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
SMSP52788 AL034555.1-201ENST00000604816 211 ntBASIC2.03□□□□□ -2.08
SMSP52788 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.03□□□□□ -2.08
SMSP52788 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
SMSP52788 AC103705.1-201ENST00000619013 241 ntBASIC2.03□□□□□ -2.08
SMSP52788 AL162373.1-201ENST00000620433 407 ntBASIC2.03□□□□□ -2.08
SMSP52788 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.03□□□□□ -2.08
SMSP52788 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
SMSP52788 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMSP52788 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SMSP52788 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMSP52788 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.09
SMSP52788 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMSP52788 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMSP52788 U3.13-201ENST00000364804 214 ntBASIC2.02□□□□□ -2.09
SMSP52788 RNU6-827P-201ENST00000365553 106 ntBASIC2.02□□□□□ -2.09
SMSP52788 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
SMSP52788 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
SMSP52788 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
SMSP52788 RNU2-16P-201ENST00000410712 136 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.02□□□□□ -2.09
SMSP52788 USP9YP14-201ENST00000430663 563 ntBASIC2.02□□□□□ -2.09
SMSP52788 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.02□□□□□ -2.09
SMSP52788 AC244670.1-201ENST00000436879 112 ntBASIC2.02□□□□□ -2.09
SMSP52788 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.02□□□□□ -2.09
SMSP52788 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.02□□□□□ -2.09
SMSP52788 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
SMSP52788 AL031274.1-201ENST00000450334 232 ntBASIC2.02□□□□□ -2.09
SMSP52788 PRELID3BP1-201ENST00000457142 540 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC087884.1-201ENST00000469738 328 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.02□□□□□ -2.09
SMSP52788 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
SMSP52788 AK3P2-201ENST00000507976 429 ntBASIC2.02□□□□□ -2.09
SMSP52788 RNA5SP458-201ENST00000516188 119 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.02□□□□□ -2.09
SMSP52788 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.02□□□□□ -2.09
SMSP52788 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.02□□□□□ -2.09
SMSP52788 RNU6-85P-201ENST00000605989 107 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC048344.4-201ENST00000619744 527 ntBASIC2.02□□□□□ -2.09
SMSP52788 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
SMSP52788 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.02□□□□□ -2.09
SMSP52788 AC124864.2-201ENST00000624736 186 ntBASIC2.02□□□□□ -2.09
SMSP52788 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SMSP52788 AC092268.1-201ENST00000342691 405 ntBASIC2.01□□□□□ -2.09
SMSP52788 RNU4-15P-201ENST00000362613 141 ntBASIC2.01□□□□□ -2.09
SMSP52788 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
SMSP52788 AL512604.1-201ENST00000404812 257 ntBASIC2.01□□□□□ -2.09
SMSP52788 RN7SKP32-201ENST00000410167 303 ntBASIC2.01□□□□□ -2.09
SMSP52788 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
SMSP52788 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.01□□□□□ -2.09
SMSP52788 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.01□□□□□ -2.09
SMSP52788 AC018634.1-201ENST00000437554 401 ntBASIC2.01□□□□□ -2.09
SMSP52788 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.01□□□□□ -2.09
SMSP52788 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
SMSP52788 AC009646.1-201ENST00000510455 318 ntBASIC2.01□□□□□ -2.09
SMSP52788 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.01□□□□□ -2.09
SMSP52788 RNU6-189P-201ENST00000516120 101 ntBASIC2.01□□□□□ -2.09
SMSP52788 CENPUP1-201ENST00000526649 1202 ntBASIC2.01□□□□□ -2.09
SMSP52788 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMSP52788 AC103996.1-201ENST00000555468 102 ntBASIC2.01□□□□□ -2.09
SMSP52788 VN1R80P-201ENST00000597126 338 ntBASIC2.01□□□□□ -2.09
SMSP52788 AL109918.3-201ENST00000603072 338 ntBASIC2.01□□□□□ -2.09
SMSP52788 AL359880.1-201ENST00000621879 266 ntBASIC2.01□□□□□ -2.09
SMSP52788 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
SMSP52788 SNORD98-201ENST00000636377 67 ntBASIC2.01□□□□□ -2.09
SMSP52788 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMSP52788 RNA5SP99-201ENST00000364020 114 ntBASIC2□□□□□ -2.09
SMSP52788 RNU6-38P-201ENST00000384085 107 ntBASIC2□□□□□ -2.09
SMSP52788 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
SMSP52788 MTCO3P40-201ENST00000392516 676 ntBASIC2□□□□□ -2.09
SMSP52788 MTCYBP2-201ENST00000407745 171 ntBASIC2□□□□□ -2.09
SMSP52788 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
SMSP52788 AP000275.1-201ENST00000411943 390 ntBASIC2□□□□□ -2.09
SMSP52788 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2□□□□□ -2.09
SMSP52788 MTND2P22-201ENST00000444325 1033 ntBASIC2□□□□□ -2.09
SMSP52788 MTATP6P26-201ENST00000445926 662 ntBASIC2□□□□□ -2.09
SMSP52788 TPTE2P5-203ENST00000458118 728 ntBASIC2□□□□□ -2.09
SMSP52788 RNU6-333P-201ENST00000459117 107 ntBASIC2□□□□□ -2.09
SMSP52788 SRRM1P2-201ENST00000464531 1192 ntBASIC2□□□□□ -2.09
SMSP52788 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms