Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AL357078.3-201ENST00000607528 618 ntBASIC2.8□□□□□ -1.96
CTCFP49711 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CTCFP49711 RNU6-105P-201ENST00000363909 104 ntBASIC2.79□□□□□ -1.96
CTCFP49711 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTCFP49711 SNORD73A-201ENST00000386062 65 ntBASIC2.79□□□□□ -1.96
CTCFP49711 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.79□□□□□ -1.96
CTCFP49711 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.79□□□□□ -1.96
CTCFP49711 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
CTCFP49711 MTND1P2-201ENST00000430604 821 ntBASIC2.79□□□□□ -1.96
CTCFP49711 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.79□□□□□ -1.96
CTCFP49711 FABP5P14-201ENST00000437273 393 ntBASIC2.79□□□□□ -1.96
CTCFP49711 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.79□□□□□ -1.96
CTCFP49711 AC087854.1-201ENST00000519706 414 ntBASIC2.79□□□□□ -1.96
CTCFP49711 RNU6-323P-201ENST00000521915 107 ntBASIC2.79□□□□□ -1.96
CTCFP49711 RPS15AP11-201ENST00000594193 385 ntBASIC2.79□□□□□ -1.96
CTCFP49711 AL359821.1-201ENST00000605519 182 ntBASIC2.79□□□□□ -1.96
CTCFP49711 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CTCFP49711 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CTCFP49711 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTCFP49711 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CTCFP49711 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.96
CTCFP49711 RNU6-428P-201ENST00000362942 107 ntBASIC2.78□□□□□ -1.96
CTCFP49711 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
CTCFP49711 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
CTCFP49711 U6atac.2-201ENST00000408644 118 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.78□□□□□ -1.96
CTCFP49711 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTCFP49711 RBMX2P4-201ENST00000441256 376 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.78□□□□□ -1.96
CTCFP49711 AL031274.1-201ENST00000450334 232 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AC007547.1-201ENST00000462177 490 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
CTCFP49711 RNU6-377P-201ENST00000515965 102 ntBASIC2.78□□□□□ -1.96
CTCFP49711 RNU6-358P-201ENST00000516564 75 ntBASIC2.78□□□□□ -1.96
CTCFP49711 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
CTCFP49711 RNU6-1314P-201ENST00000517139 104 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AP000763.2-201ENST00000540641 163 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AC079598.5-201ENST00000547460 117 ntBASIC2.78□□□□□ -1.96
CTCFP49711 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
CTCFP49711 SNORA4-201ENST00000584302 138 ntBASIC2.78□□□□□ -1.96
CTCFP49711 MIR4765-201ENST00000585007 77 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AC060780.3-201ENST00000589464 80 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AL049779.4-201ENST00000604500 156 ntBASIC2.78□□□□□ -1.96
CTCFP49711 FO624990.1-201ENST00000636373 85 ntBASIC2.78□□□□□ -1.96
CTCFP49711 AC100810.6-201ENST00000638068 285 ntBASIC2.78□□□□□ -1.96
CTCFP49711 SNORD56.1-201ENST00000362913 68 ntBASIC2.77□□□□□ -1.97
CTCFP49711 Y_RNA.100-201ENST00000363141 102 ntBASIC2.77□□□□□ -1.97
CTCFP49711 RNU6-254P-201ENST00000363377 107 ntBASIC2.77□□□□□ -1.97
CTCFP49711 RNU6-336P-201ENST00000364891 107 ntBASIC2.77□□□□□ -1.97
CTCFP49711 RNU6-827P-201ENST00000365553 106 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AL513185.2-201ENST00000425543 193 ntBASIC2.77□□□□□ -1.97
CTCFP49711 Z82205.1-201ENST00000428456 297 ntBASIC2.77□□□□□ -1.97
CTCFP49711 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.77□□□□□ -1.97
CTCFP49711 AC007969.2-201ENST00000441891 191 ntBASIC2.77□□□□□ -1.97
CTCFP49711 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AF213884.2-201ENST00000510417 903 ntBASIC2.77□□□□□ -1.97
CTCFP49711 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.77□□□□□ -1.97
CTCFP49711 MIR449C-201ENST00000516047 92 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AF235103.2-201ENST00000525753 346 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AC025423.5-201ENST00000550230 219 ntBASIC2.77□□□□□ -1.97
CTCFP49711 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.77□□□□□ -1.97
CTCFP49711 AC090897.2-201ENST00000581715 130 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AC097372.5-201ENST00000623665 376 ntBASIC2.77□□□□□ -1.97
CTCFP49711 MIR219B-201ENST00000637023 88 ntBASIC2.77□□□□□ -1.97
CTCFP49711 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.76□□□□□ -1.97
CTCFP49711 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CTCFP49711 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CTCFP49711 Y_RNA.112-201ENST00000363250 102 ntBASIC2.76□□□□□ -1.97
CTCFP49711 RPS29P13-201ENST00000402041 169 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AL162578.1-201ENST00000406202 378 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AL359672.1-201ENST00000442302 409 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.76□□□□□ -1.97
CTCFP49711 AL163540.1-201ENST00000485382 386 ntBASIC2.76□□□□□ -1.97
CTCFP49711 RPL36AP48-201ENST00000485521 314 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AC018437.1-201ENST00000492214 406 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AC103996.1-201ENST00000555468 102 ntBASIC2.76□□□□□ -1.97
CTCFP49711 PSMA3P-201ENST00000555485 635 ntBASIC2.76□□□□□ -1.97
CTCFP49711 AC244517.12-201ENST00000623581 663 ntBASIC2.76□□□□□ -1.97
CTCFP49711 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.76□□□□□ -1.97
CTCFP49711 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.76□□□□□ -1.97
CTCFP49711 RNU6-527P-201ENST00000363425 104 ntBASIC2.75□□□□□ -1.97
CTCFP49711 RNU6-1283P-201ENST00000365314 105 ntBASIC2.75□□□□□ -1.97
CTCFP49711 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTCFP49711 MIR450B-201ENST00000401182 78 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.75□□□□□ -1.97
CTCFP49711 RPL30P4-201ENST00000429309 333 ntBASIC2.75□□□□□ -1.97
CTCFP49711 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTCFP49711 AC112771.1-201ENST00000463581 102 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC090096.1-201ENST00000489168 390 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.75□□□□□ -1.97
CTCFP49711 SNORA25.11-201ENST00000515935 105 ntBASIC2.75□□□□□ -1.97
CTCFP49711 RNA5SP112-201ENST00000515937 99 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
CTCFP49711 CKS1BP7-201ENST00000522230 235 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.75□□□□□ -1.97
CTCFP49711 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.75□□□□□ -1.97
CTCFP49711 MIR4658-201ENST00000584344 65 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC018638.8-201ENST00000588755 281 ntBASIC2.75□□□□□ -1.97
CTCFP49711 AC064836.2-201ENST00000609491 462 ntBASIC2.75□□□□□ -1.97
CTCFP49711 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms