Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SCARNA3-201ENST00000517097 143 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NEDD4P46934 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.25□□□□□ -2.05
NEDD4P46934 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
NEDD4P46934 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.25□□□□□ -2.05
NEDD4P46934 VN1R107P-201ENST00000601784 209 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 AC123912.5-201ENST00000605470 343 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.25□□□□□ -2.05
NEDD4P46934 Y_RNA.373-201ENST00000365600 103 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 Y_RNA.530-201ENST00000384587 101 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 U6atac.2-201ENST00000408644 118 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 Y_RNA.615-201ENST00000410769 117 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 RNU6-1245P-201ENST00000411130 106 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD4P46934 AC009161.1-201ENST00000417306 376 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.24□□□□□ -2.05
NEDD4P46934 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.24□□□□□ -2.05
NEDD4P46934 NDUFA5P4-201ENST00000436704 385 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD4P46934 AC080013.2-201ENST00000460866 323 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AC007547.1-201ENST00000462177 490 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AC117503.1-201ENST00000472241 394 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AP001025.1-201ENST00000486139 332 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 TRBVA-201ENST00000498804 316 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD4P46934 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD4P46934 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.24□□□□□ -2.05
NEDD4P46934 MIR5692C1-201ENST00000585309 91 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 BNIP3P25-201ENST00000596023 559 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD4P46934 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
NEDD4P46934 MIR3662-201ENST00000637030 95 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD4P46934 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEDD4P46934 MTND4P27-201ENST00000450813 1354 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 AC080128.1-201ENST00000474389 1917 ntBASIC2.24□□□□□ -2.05
NEDD4P46934 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 SNORD56.1-201ENST00000362913 68 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 SET-203ENST00000372688 801 ntTSL 2 BASIC2.23□□□□□ -2.05
NEDD4P46934 RNU6-622P-201ENST00000384272 103 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NEDD4P46934 U8.13-201ENST00000390842 128 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NEDD4P46934 AC138623.1-201ENST00000418060 216 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AL117339.3-201ENST00000418733 162 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 EIF1AXP1-201ENST00000419267 435 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.23□□□□□ -2.05
NEDD4P46934 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD4P46934 MTCO2P3-201ENST00000442543 421 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AC083904.1-201ENST00000487828 231 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD4P46934 Y_RNA.665-201ENST00000516177 98 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 RNU1-104P-201ENST00000517280 175 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.23□□□□□ -2.05
NEDD4P46934 RNU6-323P-201ENST00000521915 107 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD4P46934 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.23□□□□□ -2.05
NEDD4P46934 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 MIR4769-201ENST00000584126 77 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AL357078.3-201ENST00000607528 618 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 AL121757.2-201ENST00000611223 313 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.23□□□□□ -2.05
NEDD4P46934 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NEDD4P46934 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NEDD4P46934 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
NEDD4P46934 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.22□□□□□ -2.05
NEDD4P46934 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 SNORD113-7-201ENST00000363762 77 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 RNU6-105P-201ENST00000363909 104 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 MIR9-3-201ENST00000385084 90 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 RPS29P13-201ENST00000402041 169 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD4P46934 AC003685.2-201ENST00000422795 395 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 MRPS10P2-201ENST00000431226 381 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AL445687.1-201ENST00000439946 251 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD4P46934 AL359672.1-201ENST00000442302 409 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 snoU13.23-201ENST00000458863 104 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 RN7SKP40-201ENST00000517211 242 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 PSMA3P-201ENST00000555485 635 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.22□□□□□ -2.05
NEDD4P46934 AL133241.1-201ENST00000556832 487 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AC100830.2-201ENST00000581636 240 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AC090897.2-201ENST00000581715 130 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 MIR3117-201ENST00000584034 78 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 BNIP3P16-201ENST00000589779 534 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 MIR6845-201ENST00000613182 61 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AC024581.2-201ENST00000619986 252 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 AC007792.1-201ENST00000623023 402 ntBASIC2.22□□□□□ -2.05
NEDD4P46934 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NEDD4P46934 RNU6-254P-201ENST00000363377 107 ntBASIC2.21□□□□□ -2.06
NEDD4P46934 Y_RNA.248-201ENST00000364501 109 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms