Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 Y_RNA.332-201ENST00000365271 113 ntBASIC1.71□□□□□ -2.14
MDH1P40925 RNU6-438P-201ENST00000365561 103 ntBASIC1.71□□□□□ -2.14
MDH1P40925 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
MDH1P40925 SNORA16.2-201ENST00000390991 127 ntBASIC1.71□□□□□ -2.14
MDH1P40925 MTCYBP2-201ENST00000407745 171 ntBASIC1.71□□□□□ -2.14
MDH1P40925 MTCO3P41-201ENST00000414801 328 ntBASIC1.71□□□□□ -2.14
MDH1P40925 AL117339.3-201ENST00000418733 162 ntBASIC1.71□□□□□ -2.14
MDH1P40925 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.71□□□□□ -2.14
MDH1P40925 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.71□□□□□ -2.14
MDH1P40925 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.71□□□□□ -2.14
MDH1P40925 SNRPFP3-201ENST00000457792 225 ntBASIC1.71□□□□□ -2.14
MDH1P40925 RPL31P3-201ENST00000458430 332 ntBASIC1.71□□□□□ -2.14
MDH1P40925 RNU1-131P-201ENST00000458943 161 ntBASIC1.71□□□□□ -2.14
MDH1P40925 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
MDH1P40925 AC016632.1-201ENST00000503994 196 ntBASIC1.71□□□□□ -2.14
MDH1P40925 YWHAEP4-201ENST00000505390 198 ntBASIC1.71□□□□□ -2.14
MDH1P40925 AC092436.1-201ENST00000506450 503 ntBASIC1.71□□□□□ -2.14
MDH1P40925 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
MDH1P40925 SNORA25.17-201ENST00000517184 124 ntBASIC1.71□□□□□ -2.14
MDH1P40925 LRRC34P1-201ENST00000542742 915 ntBASIC1.71□□□□□ -2.14
MDH1P40925 AC012414.6-201ENST00000568241 401 ntBASIC1.71□□□□□ -2.14
MDH1P40925 MIR3913-1-201ENST00000577744 102 ntBASIC1.71□□□□□ -2.14
MDH1P40925 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
MDH1P40925 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.71□□□□□ -2.14
MDH1P40925 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MDH1P40925 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
MDH1P40925 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MDH1P40925 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
MDH1P40925 U3.9-201ENST00000363823 204 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNU6-266P-201ENST00000364225 107 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNU6-1106P-201ENST00000390845 107 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNU2-9P-201ENST00000410194 145 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.7□□□□□ -2.14
MDH1P40925 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AL645568.3-201ENST00000433683 316 ntBASIC1.7□□□□□ -2.14
MDH1P40925 C1DP4-201ENST00000455429 424 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.7□□□□□ -2.14
MDH1P40925 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.7□□□□□ -2.14
MDH1P40925 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.7□□□□□ -2.14
MDH1P40925 RNU6-567P-201ENST00000516746 107 ntBASIC1.7□□□□□ -2.14
MDH1P40925 SNORA31.16-201ENST00000516773 139 ntBASIC1.7□□□□□ -2.14
MDH1P40925 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.7□□□□□ -2.14
MDH1P40925 AC087441.2-201ENST00000529141 262 ntBASIC1.7□□□□□ -2.14
MDH1P40925 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
MDH1P40925 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.7□□□□□ -2.14
MDH1P40925 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.7□□□□□ -2.14
MDH1P40925 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.7□□□□□ -2.14
MDH1P40925 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
MDH1P40925 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MDH1P40925 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
MDH1P40925 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.69□□□□□ -2.14
MDH1P40925 RNU6-1120P-201ENST00000362988 108 ntBASIC1.69□□□□□ -2.14
MDH1P40925 RNU6-827P-201ENST00000365553 106 ntBASIC1.69□□□□□ -2.14
MDH1P40925 Y_RNA.399-201ENST00000383955 105 ntBASIC1.69□□□□□ -2.14
MDH1P40925 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.69□□□□□ -2.14
MDH1P40925 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.69□□□□□ -2.14
MDH1P40925 RPS6P15-201ENST00000431996 751 ntBASIC1.69□□□□□ -2.14
MDH1P40925 SNAP23P1-201ENST00000433229 246 ntBASIC1.69□□□□□ -2.14
MDH1P40925 AC002486.1-201ENST00000435098 391 ntBASIC1.69□□□□□ -2.14
MDH1P40925 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
MDH1P40925 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.69□□□□□ -2.14
MDH1P40925 AC010486.2-201ENST00000505572 483 ntBASIC1.69□□□□□ -2.14
MDH1P40925 FAM206BP-201ENST00000510179 541 ntBASIC1.69□□□□□ -2.14
MDH1P40925 MTCO3P23-201ENST00000561363 289 ntBASIC1.69□□□□□ -2.14
MDH1P40925 AC145350.1-201ENST00000567426 208 ntBASIC1.69□□□□□ -2.14
MDH1P40925 MIR4648-201ENST00000580107 72 ntBASIC1.69□□□□□ -2.14
MDH1P40925 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
MDH1P40925 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.69□□□□□ -2.14
MDH1P40925 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
MDH1P40925 U2.17-201ENST00000611454 95 ntBASIC1.69□□□□□ -2.14
MDH1P40925 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
MDH1P40925 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
MDH1P40925 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
MDH1P40925 SNORD114-6-201ENST00000364393 72 ntBASIC1.68□□□□□ -2.14
MDH1P40925 SNORD32A-201ENST00000364805 84 ntBASIC1.68□□□□□ -2.14
MDH1P40925 SNORA70B-201ENST00000384210 135 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 AL133396.1-201ENST00000432048 687 ntBASIC1.68□□□□□ -2.14
MDH1P40925 MTND4P32-201ENST00000437189 1237 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
MDH1P40925 RNU7-167P-201ENST00000459160 62 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AC130509.1-201ENST00000464158 433 ntBASIC1.68□□□□□ -2.14
MDH1P40925 MTND3P7-201ENST00000474435 343 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 AL137161.1-201ENST00000532231 390 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.68□□□□□ -2.14
MDH1P40925 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.68□□□□□ -2.14
MDH1P40925 AC103996.1-201ENST00000555468 102 ntBASIC1.68□□□□□ -2.14
MDH1P40925 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.68□□□□□ -2.14
MDH1P40925 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.68□□□□□ -2.14
MDH1P40925 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms