Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD12P35452 AC010186.2-204ENST00000537668 439 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AC090616.3-201ENST00000582184 217 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 MIR4435-1-201ENST00000582552 80 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 MIR3171-201ENST00000584270 74 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AC018889.1-201ENST00000605372 397 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 AC135776.4-201ENST00000624300 1904 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 CDC27P3-201ENST00000635418 1910 ntBASIC3.01□□□□□ -1.93
HOXD12P35452 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXD12P35452 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
HOXD12P35452 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXD12P35452 DLEU2_6.3-201ENST00000340052 136 ntBASIC3□□□□□ -1.93
HOXD12P35452 RNU6-858P-201ENST00000362436 107 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.445-201ENST00000384168 102 ntBASIC3□□□□□ -1.93
HOXD12P35452 MIR521-1-201ENST00000384902 87 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3□□□□□ -1.93
HOXD12P35452 AC063976.3-201ENST00000426849 329 ntBASIC3□□□□□ -1.93
HOXD12P35452 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3□□□□□ -1.93
HOXD12P35452 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3□□□□□ -1.93
HOXD12P35452 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3□□□□□ -1.93
HOXD12P35452 AL118496.2-201ENST00000448300 230 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC133134.1-201ENST00000466800 359 ntBASIC3□□□□□ -1.93
HOXD12P35452 RPS29P26-201ENST00000477483 171 ntBASIC3□□□□□ -1.93
HOXD12P35452 RPL23AP49-201ENST00000492925 468 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC116655.1-201ENST00000508324 901 ntBASIC3□□□□□ -1.93
HOXD12P35452 SCARNA16.2-201ENST00000516520 172 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
HOXD12P35452 MIR4273-201ENST00000582824 84 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC091152.3-201ENST00000604227 325 ntBASIC3□□□□□ -1.93
HOXD12P35452 AC005046.1-201ENST00000608515 625 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.812-201ENST00000610788 101 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.784-201ENST00000613803 101 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.787-201ENST00000616522 101 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.780-201ENST00000617336 101 ntBASIC3□□□□□ -1.93
HOXD12P35452 Y_RNA.801-201ENST00000619005 101 ntBASIC3□□□□□ -1.93
HOXD12P35452 DLEU2_6.2-201ENST00000620994 136 ntBASIC3□□□□□ -1.93
HOXD12P35452 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
HOXD12P35452 AC062016.1-201ENST00000355719 319 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 Y_RNA.326-201ENST00000365176 113 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 Y_RNA.395-201ENST00000383945 109 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 RNU6-1040P-201ENST00000383974 107 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 SNORD116-20-201ENST00000384529 92 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 SNORA75.6-201ENST00000391318 127 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 RPS29P13-201ENST00000402041 169 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 FTH1P15-201ENST00000406984 280 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXD12P35452 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 AC117440.1-201ENST00000474107 571 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 SCARNA15.1-201ENST00000516384 125 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 RNU6-612P-201ENST00000516909 102 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 AP005902.1-201ENST00000521358 186 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXD12P35452 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 AC104984.5-201ENST00000586878 94 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXD12P35452 AC097372.5-201ENST00000623665 376 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
HOXD12P35452 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXD12P35452 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXD12P35452 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD12P35452 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD12P35452 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXD12P35452 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD12P35452 RNU6-105P-201ENST00000363909 104 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 U8.8-201ENST00000365399 135 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 RNU6-174P-201ENST00000410406 106 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 BX276092.3-201ENST00000424182 230 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 MTND3P9-201ENST00000429526 346 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 AL591043.1-201ENST00000432461 424 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 MICF-203ENST00000432679 129 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 MRPL42P6-201ENST00000486397 371 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 RNU6-470P-201ENST00000515954 104 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 RNA5SP217-201ENST00000515959 91 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 RNU6-307P-201ENST00000516743 106 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 AC005899.2-201ENST00000584353 90 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 MIR4765-201ENST00000585007 77 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXD12P35452 SNRPGP17-201ENST00000603780 214 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 uc_338.22-201ENST00000622722 187 ntBASIC2.98□□□□□ -1.93
HOXD12P35452 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD12P35452 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXD12P35452 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXD12P35452 Y_RNA.48-201ENST00000362710 103 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 Y_RNA.216-201ENST00000364205 93 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 RNU6-596P-201ENST00000365395 98 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 RNU6-748P-201ENST00000384648 107 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXD12P35452 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD12P35452 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXD12P35452 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD12P35452 AC124916.1-201ENST00000444020 547 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 FO393415.2-201ENST00000480085 343 ntBASIC2.97□□□□□ -1.93
HOXD12P35452 AC090096.1-201ENST00000489168 390 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms