Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 Y_RNA.780-201ENST00000617336 101 ntBASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.801-201ENST00000619005 101 ntBASIC2.95□□□□□ -1.94
CIITAP33076 AC092608.2-201ENST00000624427 218 ntBASIC2.95□□□□□ -1.94
CIITAP33076 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CIITAP33076 MTND5P30-201ENST00000452896 1731 ntBASIC2.95□□□□□ -1.94
CIITAP33076 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CIITAP33076 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.95□□□□□ -1.94
CIITAP33076 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CIITAP33076 CDC27P3-201ENST00000635418 1910 ntBASIC2.94□□□□□ -1.94
CIITAP33076 RNU6-336P-201ENST00000364891 107 ntBASIC2.94□□□□□ -1.94
CIITAP33076 MIR559-201ENST00000385188 96 ntBASIC2.94□□□□□ -1.94
CIITAP33076 SNORA75.6-201ENST00000391318 127 ntBASIC2.94□□□□□ -1.94
CIITAP33076 RPS29P13-201ENST00000402041 169 ntBASIC2.94□□□□□ -1.94
CIITAP33076 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.94□□□□□ -1.94
CIITAP33076 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.94□□□□□ -1.94
CIITAP33076 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CIITAP33076 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.94□□□□□ -1.94
CIITAP33076 HMGN2P10-201ENST00000448085 265 ntBASIC2.94□□□□□ -1.94
CIITAP33076 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CIITAP33076 Y_RNA.631-201ENST00000459607 101 ntBASIC2.94□□□□□ -1.94
CIITAP33076 SNORA43.2-201ENST00000516652 128 ntBASIC2.94□□□□□ -1.94
CIITAP33076 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.94□□□□□ -1.94
CIITAP33076 AL442663.2-201ENST00000554385 511 ntBASIC2.94□□□□□ -1.94
CIITAP33076 AL121821.2-201ENST00000556081 394 ntBASIC2.94□□□□□ -1.94
CIITAP33076 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.94□□□□□ -1.94
CIITAP33076 MIR3976-201ENST00000606807 139 ntBASIC2.94□□□□□ -1.94
CIITAP33076 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CIITAP33076 MTND5P10-201ENST00000603719 1809 ntBASIC2.93□□□□□ -1.94
CIITAP33076 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.93□□□□□ -1.94
CIITAP33076 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CIITAP33076 Y_RNA.112-201ENST00000363250 102 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RNU5E-7P-201ENST00000365290 117 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RNU6-596P-201ENST00000365395 98 ntBASIC2.93□□□□□ -1.94
CIITAP33076 U8.8-201ENST00000365399 135 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RNU6-1040P-201ENST00000383974 107 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RNU6-308P-201ENST00000390957 107 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RNU6-293P-201ENST00000411259 106 ntBASIC2.93□□□□□ -1.94
CIITAP33076 OSTCP8-201ENST00000445117 448 ntBASIC2.93□□□□□ -1.94
CIITAP33076 MIR2053-201ENST00000459295 91 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RPS29P27-201ENST00000463711 170 ntBASIC2.93□□□□□ -1.94
CIITAP33076 RPL9P9-202ENST00000466501 579 ntBASIC2.93□□□□□ -1.94
CIITAP33076 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.93□□□□□ -1.94
CIITAP33076 SCARNA16.2-201ENST00000516520 172 ntBASIC2.93□□□□□ -1.94
CIITAP33076 AC109479.2-201ENST00000517842 174 ntBASIC2.93□□□□□ -1.94
CIITAP33076 HSPE1P20-201ENST00000538133 289 ntBASIC2.93□□□□□ -1.94
CIITAP33076 AC021739.1-201ENST00000559631 174 ntBASIC2.93□□□□□ -1.94
CIITAP33076 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
CIITAP33076 CYP2C61P-201ENST00000604072 290 ntBASIC2.93□□□□□ -1.94
CIITAP33076 AC011890.2-201ENST00000613393 294 ntBASIC2.93□□□□□ -1.94
CIITAP33076 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.93□□□□□ -1.94
CIITAP33076 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.93□□□□□ -1.94
CIITAP33076 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CIITAP33076 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CIITAP33076 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CIITAP33076 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.92□□□□□ -1.94
CIITAP33076 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CIITAP33076 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CIITAP33076 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CIITAP33076 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CIITAP33076 SNORA63-201ENST00000363450 132 ntBASIC2.92□□□□□ -1.94
CIITAP33076 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
CIITAP33076 MIR196B-201ENST00000384852 84 ntBASIC2.92□□□□□ -1.94
CIITAP33076 AC018865.2-201ENST00000423631 129 ntBASIC2.92□□□□□ -1.94
CIITAP33076 USMG5P1-201ENST00000425964 177 ntBASIC2.92□□□□□ -1.94
CIITAP33076 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.92□□□□□ -1.94
CIITAP33076 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
CIITAP33076 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.92□□□□□ -1.94
CIITAP33076 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.92□□□□□ -1.94
CIITAP33076 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.92□□□□□ -1.94
CIITAP33076 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.92□□□□□ -1.94
CIITAP33076 SCARNA11.3-201ENST00000517276 130 ntBASIC2.92□□□□□ -1.94
CIITAP33076 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
CIITAP33076 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
CIITAP33076 SNRPGP18-201ENST00000553000 214 ntBASIC2.92□□□□□ -1.94
CIITAP33076 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.92□□□□□ -1.94
CIITAP33076 MTCO3P13-201ENST00000577757 781 ntBASIC2.92□□□□□ -1.94
CIITAP33076 PISRT1.1-201ENST00000616930 107 ntBASIC2.92□□□□□ -1.94
CIITAP33076 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.92□□□□□ -1.94
CIITAP33076 SCARNA4-202ENST00000625402 129 ntBASIC2.92□□□□□ -1.94
CIITAP33076 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CIITAP33076 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CIITAP33076 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CIITAP33076 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CIITAP33076 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CIITAP33076 RNU6-105P-201ENST00000363909 104 ntBASIC2.91□□□□□ -1.94
CIITAP33076 SNORA68.1-201ENST00000364537 132 ntBASIC2.91□□□□□ -1.94
CIITAP33076 SNORA22B-201ENST00000383876 138 ntBASIC2.91□□□□□ -1.94
CIITAP33076 Y_RNA.445-201ENST00000384168 102 ntBASIC2.91□□□□□ -1.94
CIITAP33076 Y_RNA.463-201ENST00000384271 102 ntBASIC2.91□□□□□ -1.94
CIITAP33076 Y_RNA.496-201ENST00000384444 101 ntBASIC2.91□□□□□ -1.94
CIITAP33076 MIR627-201ENST00000384979 97 ntBASIC2.91□□□□□ -1.94
CIITAP33076 MIR27B-201ENST00000385129 97 ntBASIC2.91□□□□□ -1.94
CIITAP33076 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AL590004.1-201ENST00000405321 300 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AL513475.1-201ENST00000406602 315 ntBASIC2.91□□□□□ -1.94
CIITAP33076 RNU2-25P-201ENST00000411041 191 ntBASIC2.91□□□□□ -1.94
CIITAP33076 BX276092.3-201ENST00000424182 230 ntBASIC2.91□□□□□ -1.94
CIITAP33076 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.91□□□□□ -1.94
CIITAP33076 DAP3P1-201ENST00000441522 278 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms