Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR124-3-201ENST00000384866 87 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 MIR548I2-201ENST00000408348 149 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 AC244098.2-201ENST00000422068 99 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR2AP24928 RPL29P29-201ENST00000448725 423 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 RNA5SP282-201ENST00000516355 108 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 RNU5B-3P-201ENST00000516601 115 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR2AP24928 AL158827.2-201ENST00000602494 330 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 AC110741.2-201ENST00000605278 268 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 AL691447.3-201ENST00000635020 330 ntBASIC3.23□□□□□ -1.89
POLR2AP24928 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2AP24928 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2AP24928 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2AP24928 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2AP24928 AC092593.1-201ENST00000515413 1815 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2AP24928 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2AP24928 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 SNORA53-201ENST00000391141 249 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 AL513475.1-201ENST00000406602 315 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 AC098614.2-201ENST00000426040 255 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 AC124916.1-201ENST00000444020 547 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 RPS20P22-201ENST00000473700 357 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.22□□□□□ -1.89
POLR2AP24928 SERF1AP1-201ENST00000514575 187 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 RN7SKP43-201ENST00000516173 320 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 RNA5SP320-201ENST00000516263 124 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 SNORA40.15-201ENST00000516884 107 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR2AP24928 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2AP24928 MIR5188-201ENST00000583467 113 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 MIR548AC-201ENST00000585049 88 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 MIR3976-201ENST00000606807 139 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 MIR6715B-201ENST00000637172 77 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 AC009812.4-201ENST00000569134 1805 ntBASIC3.22□□□□□ -1.89
POLR2AP24928 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
POLR2AP24928 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR2AP24928 Y_RNA.461-201ENST00000384263 103 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
POLR2AP24928 AL078601.1-201ENST00000444542 271 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.21□□□□□ -1.89
POLR2AP24928 AC105758.1-201ENST00000506038 399 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AC067942.3-201ENST00000512025 362 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 SNORA31.19-201ENST00000517079 126 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AC107918.3-201ENST00000533272 382 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.21□□□□□ -1.89
POLR2AP24928 AC090617.3-201ENST00000573670 475 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.21□□□□□ -1.89
POLR2AP24928 AC098479.1-201ENST00000609225 154 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.89
POLR2AP24928 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.21□□□□□ -1.89
POLR2AP24928 Z73965.1-201ENST00000623412 2297 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
POLR2AP24928 RNY3P11-201ENST00000364153 102 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 RPS6P12-201ENST00000432491 726 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR2AP24928 SNORA31.18-201ENST00000517043 134 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.21□□□□□ -1.9
POLR2AP24928 AL355877.2-201ENST00000603670 358 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 AC127459.3-201ENST00000624328 466 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 SCARNA4-202ENST00000625402 129 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 U6.104-201ENST00000637979 90 ntBASIC3.21□□□□□ -1.9
POLR2AP24928 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
POLR2AP24928 RNU5A-1-201ENST00000362698 116 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 snoU2_19.2-201ENST00000363024 80 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU6-1167P-201ENST00000363227 94 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 SNORD115-46-201ENST00000390982 71 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU4-78P-201ENST00000410940 126 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AL138785.1-201ENST00000425821 331 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 SUMO1P2-201ENST00000452524 304 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 SNRPGP5-201ENST00000456003 220 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AL160314.1-201ENST00000490836 438 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
POLR2AP24928 CR383656.8-201ENST00000549046 145 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR2AP24928 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR2AP24928 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
POLR2AP24928 Y_RNA.20-201ENST00000362479 113 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU6-428P-201ENST00000362942 107 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 Y_RNA.462-201ENST00000384268 102 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 MIR3074-201ENST00000384885 81 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 Y_RNA.581-201ENST00000391017 97 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPL21P75-201ENST00000396599 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPL21P28-201ENST00000401418 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RNU6-1203P-201ENST00000410703 110 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AL590556.1-201ENST00000423231 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 LINC01399-202ENST00000458450 244 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPL21P39-201ENST00000463605 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AC087190.1-201ENST00000484462 480 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AC107032.1-201ENST00000485945 480 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AC132942.1-201ENST00000486753 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 AC093591.1-201ENST00000491435 481 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPL21P16-201ENST00000495531 483 ntBASIC3.2□□□□□ -1.9
POLR2AP24928 RPS29P21-201ENST00000496272 170 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms