Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC093303.1-201ENST00000514549 295 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 RNU7-175P-201ENST00000515915 61 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.81□□□□□ -1.96
TNFSF4P23510 EIF4A1P12-201ENST00000551910 141 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.81□□□□□ -1.96
TNFSF4P23510 AC104581.2-201ENST00000572227 430 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 MIR4506-201ENST00000584693 77 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC005014.2-201ENST00000607795 599 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
TNFSF4P23510 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF4P23510 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF4P23510 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF4P23510 Y_RNA.48-201ENST00000362710 103 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 Y_RNA.58-201ENST00000362807 102 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNY1P16-201ENST00000363063 111 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 Y_RNA.154-201ENST00000363624 102 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 SNORA38.1-201ENST00000364172 131 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNA5SP267-201ENST00000364893 126 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNY3P1-201ENST00000365085 102 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNY3-201ENST00000365484 102 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNU6-378P-201ENST00000384324 107 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 Y_RNA.509-201ENST00000384506 99 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNU6-700P-201ENST00000391043 107 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNU6-1093P-201ENST00000391194 107 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RNU6-1304P-201ENST00000411374 106 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 MTND3P23-201ENST00000431980 347 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AC112220.1-201ENST00000434628 355 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 RPL23AP22-201ENST00000437556 453 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF4P23510 RPS4XP2-201ENST00000458402 793 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF4P23510 RNU7-152P-201ENST00000458982 64 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AC132942.1-201ENST00000486753 483 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF4P23510 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF4P23510 AP000889.1-201ENST00000530968 660 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 CBX3P7-201ENST00000532876 502 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AC074050.1-201ENST00000563247 211 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFSF4P23510 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF4P23510 AC084781.2-201ENST00000615568 161 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 AC091903.1-201ENST00000624322 454 ntBASIC2.8□□□□□ -1.96
TNFSF4P23510 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.8□□□□□ -1.96
TNFSF4P23510 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF4P23510 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TNFSF4P23510 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFSF4P23510 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFSF4P23510 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
TNFSF4P23510 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU6-944P-201ENST00000364023 107 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 SNORD32B-201ENST00000364460 84 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 Y_RNA.431-201ENST00000384086 102 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU6-1072P-201ENST00000384703 107 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU6-443P-201ENST00000384780 107 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MIR153-2-201ENST00000385225 87 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MIR1294-201ENST00000408503 142 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 AC096664.2-201ENST00000411843 406 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MTCO3P10-201ENST00000455912 772 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RN7SL283P-201ENST00000489055 303 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RPL17P19-201ENST00000489069 552 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU6-1198P-201ENST00000516904 67 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RNU6-264P-201ENST00000517134 104 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MIR5701-3-201ENST00000578890 82 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MIR5701-1-201ENST00000585138 82 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 AC010928.2-201ENST00000588017 287 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 RPL17P51-201ENST00000605218 238 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MIR5701-2-201ENST00000615634 82 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 MTND5P10-201ENST00000603719 1809 ntBASIC2.79□□□□□ -1.96
TNFSF4P23510 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TNFSF4P23510 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFSF4P23510 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFSF4P23510 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TNFSF4P23510 RNU1-23P-201ENST00000363361 144 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 Y_RNA.315-201ENST00000365117 102 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 RNU6-546P-201ENST00000383991 107 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 RNU6-890P-201ENST00000384121 107 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 RNVU1-14-201ENST00000384770 164 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 MIR32-201ENST00000384965 70 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 MTCYBP10-201ENST00000424905 650 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 Z82188.1-201ENST00000436709 154 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 HMGN1P18-201ENST00000457642 277 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 AC008155.2-201ENST00000464337 397 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 AC068781.1-201ENST00000488231 618 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 HSPE1P18-201ENST00000517602 280 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFSF4P23510 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
TNFSF4P23510 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFSF4P23510 AL627309.6-201ENST00000606857 840 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 AC100812.1-201ENST00000607622 580 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.78□□□□□ -1.96
TNFSF4P23510 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
TNFSF4P23510 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.78□□□□□ -1.97
TNFSF4P23510 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms