Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXD8P13378 AC006380.1-201ENST00000603598 186 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD8P13378 AL162713.1-201ENST00000604480 262 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 U6.105-201ENST00000637379 88 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXD8P13378 AC099654.7-201ENST00000635788 2127 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD8P13378 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD8P13378 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXD8P13378 RNU6-324P-201ENST00000363957 106 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 MIR549A-201ENST00000385268 96 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 RNU6-131P-201ENST00000391144 107 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 EI24P2-201ENST00000397776 1076 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 NDUFB4P4-201ENST00000404822 243 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 SNORA71B-202ENST00000439232 272 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXD8P13378 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXD8P13378 AC104619.4-201ENST00000510773 249 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD8P13378 AC022695.1-201ENST00000522089 237 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD8P13378 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD8P13378 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXD8P13378 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXD8P13378 NACAP3-201ENST00000552100 481 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXD8P13378 AL008718.3-201ENST00000610217 321 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AC073346.2-201ENST00000624724 2058 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.74
HOXD8P13378 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXD8P13378 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXD8P13378 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXD8P13378 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD8P13378 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXD8P13378 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXD8P13378 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD8P13378 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HOXD8P13378 MAPK10-253ENST00000641010 4072 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AC022336.2-201ENST00000568966 2538 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HOXD8P13378 Y_RNA.215-201ENST00000364204 112 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 Y_RNA.568-201ENST00000384742 113 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 PTMAP5-201ENST00000393073 333 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 RNA5SP475-201ENST00000410568 110 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 CYCSP4-201ENST00000429682 331 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 SEPT7P4-201ENST00000437076 306 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AP000705.1-201ENST00000454567 350 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 RPS27AP9-201ENST00000477681 438 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD8P13378 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD8P13378 RN7SKP18-201ENST00000516005 275 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 RNU6-966P-201ENST00000516479 104 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 CKS1BP7-201ENST00000522230 235 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AC090877.1-201ENST00000561418 344 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD8P13378 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXD8P13378 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD8P13378 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD8P13378 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.2□□□□□ -1.74
HOXD8P13378 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD8P13378 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD8P13378 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
HOXD8P13378 UBE3AP2-201ENST00000429033 2259 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD8P13378 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD8P13378 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD8P13378 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD8P13378 RNU6-151P-201ENST00000364158 107 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 RNU6-312P-201ENST00000364629 107 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 Y_RNA.412-201ENST00000384001 104 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 MIR34B-201ENST00000385076 84 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 RNA5SP129-201ENST00000410276 118 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 RN7SKP53-201ENST00000411337 315 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 AC099548.1-201ENST00000421443 426 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD8P13378 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD8P13378 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD8P13378 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD8P13378 SNORD116-25-201ENST00000516517 92 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 RNU6-107P-201ENST00000516643 102 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 AC009127.3-201ENST00000570531 403 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 MIR3922-201ENST00000585192 84 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 AL137849.1-201ENST00000604767 169 ntBASIC4.19□□□□□ -1.74
HOXD8P13378 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD8P13378 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD8P13378 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD8P13378 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXD8P13378 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD8P13378 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD8P13378 Y_RNA.23-201ENST00000362496 106 ntBASIC4.18□□□□□ -1.74
HOXD8P13378 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD8P13378 SNORA22C-201ENST00000384614 134 ntBASIC4.18□□□□□ -1.74
HOXD8P13378 MIR607-201ENST00000385241 96 ntBASIC4.18□□□□□ -1.74
HOXD8P13378 MIR208B-201ENST00000401172 77 ntBASIC4.18□□□□□ -1.74
HOXD8P13378 RPL23AP48-201ENST00000406913 488 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms