Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL138963.2-201ENST00000605137 226 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC068831.7-201ENST00000616954 363 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC006133.1-201ENST00000617106 264 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.53□□□□□ -1.84
COL6A2P12110 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
COL6A2P12110 AC004944.1-201ENST00000517807 3059 ntBASIC3.53□□□□□ -1.84
COL6A2P12110 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.53□□□□□ -1.84
COL6A2P12110 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL6A2P12110 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
COL6A2P12110 AC093010.3-201ENST00000570269 15214 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 RBBP8P1-201ENST00000449447 1844 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-1159P-201ENST00000362933 107 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 Y_RNA.319-201ENST00000365138 92 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.52□□□□□ -1.85
COL6A2P12110 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 Y_RNA.416-201ENST00000384014 113 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-281P-201ENST00000384212 103 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-541P-201ENST00000384709 110 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 MIR10B-201ENST00000385011 110 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 MIR670-201ENST00000390142 98 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 Y_RNA.581-201ENST00000391017 97 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-159P-201ENST00000391080 106 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 MIR548H3-201ENST00000408771 118 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.52□□□□□ -1.85
COL6A2P12110 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 AP002884.2-201ENST00000471647 395 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RN7SKP49-201ENST00000516675 260 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-58P-201ENST00000517143 103 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 AC093331.1-201ENST00000521474 169 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.52□□□□□ -1.85
COL6A2P12110 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.52□□□□□ -1.85
COL6A2P12110 MIR3158-1-201ENST00000583596 81 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 AC091152.3-201ENST00000604227 325 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
COL6A2P12110 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL6A2P12110 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.52□□□□□ -1.85
COL6A2P12110 AL391987.6-201ENST00000305671 199 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
COL6A2P12110 UBA52P6-201ENST00000399822 382 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 RNU2-64P-201ENST00000411315 191 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 CYCSP48-201ENST00000417124 323 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.51□□□□□ -1.85
COL6A2P12110 AC006483.1-201ENST00000487308 313 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.51□□□□□ -1.85
COL6A2P12110 AC115990.1-201ENST00000526957 301 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL6A2P12110 AC023824.2-201ENST00000566185 400 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 AC073410.2-201ENST00000603240 332 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 AC006111.3-201ENST00000622137 383 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL6A2P12110 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL6A2P12110 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL6A2P12110 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL6A2P12110 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL6A2P12110 AC002543.1-201ENST00000299783 1954 ntBASIC3.51□□□□□ -1.85
COL6A2P12110 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL6A2P12110 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL6A2P12110 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 RNU6-879P-201ENST00000364328 108 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 Y_RNA.237-201ENST00000364439 102 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL6A2P12110 RNU6-198P-201ENST00000384258 104 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 Y_RNA.462-201ENST00000384268 102 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 Y_RNA.515-201ENST00000384535 112 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 RNU6-748P-201ENST00000384648 107 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 SNORD58.1-201ENST00000391313 66 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 RNU6ATAC-201ENST00000408749 126 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 RPS15AP5-201ENST00000436276 388 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.5□□□□□ -1.85
COL6A2P12110 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.5□□□□□ -1.85
COL6A2P12110 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.5□□□□□ -1.85
COL6A2P12110 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
COL6A2P12110 Y_RNA.673-201ENST00000516306 88 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 RNA5SP54-201ENST00000516951 92 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.5□□□□□ -1.85
COL6A2P12110 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.5□□□□□ -1.85
COL6A2P12110 MIR4444-1-201ENST00000581696 74 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 MIR4444-2-201ENST00000584390 74 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 AL359198.2-201ENST00000611836 194 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 AC005296.1-201ENST00000616145 209 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.5□□□□□ -1.85
COL6A2P12110 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.5□□□□□ -1.85
COL6A2P12110 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL6A2P12110 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
COL6A2P12110 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.5□□□□□ -1.85
COL6A2P12110 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.49□□□□□ -1.85
COL6A2P12110 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms