Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TPM1P09493 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM1P09493 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.01□□□□□ -2.25
TPM1P09493 MIR3664-201ENST00000579074 99 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AL391646.1-201ENST00000603860 190 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AL022345.2-201ENST00000606307 135 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AL451064.1-201ENST00000607718 471 ntBASIC1.01□□□□□ -2.25
TPM1P09493 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.01□□□□□ -2.25
TPM1P09493 Z69720.2-201ENST00000624755 279 ntBASIC1.01□□□□□ -2.25
TPM1P09493 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
TPM1P09493 RNU6-1141P-201ENST00000364520 107 ntBASIC1□□□□□ -2.25
TPM1P09493 SNORD31B-201ENST00000364977 69 ntBASIC1□□□□□ -2.25
TPM1P09493 Y_RNA.302-201ENST00000364997 102 ntBASIC1□□□□□ -2.25
TPM1P09493 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1□□□□□ -2.25
TPM1P09493 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1□□□□□ -2.25
TPM1P09493 AC016925.1-201ENST00000458303 298 ntBASIC1□□□□□ -2.25
TPM1P09493 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
TPM1P09493 RNA5SP503-201ENST00000517047 117 ntBASIC1□□□□□ -2.25
TPM1P09493 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
TPM1P09493 AP001004.1-201ENST00000582468 324 ntBASIC1□□□□□ -2.25
TPM1P09493 AC008521.1-201ENST00000587471 187 ntBASIC1□□□□□ -2.25
TPM1P09493 RNU4-56P-201ENST00000364700 142 ntBASIC0.99□□□□□ -2.25
TPM1P09493 RNU6-809P-201ENST00000384461 107 ntBASIC0.99□□□□□ -2.25
TPM1P09493 RNU2-3P-201ENST00000410144 191 ntBASIC0.99□□□□□ -2.25
TPM1P09493 RNA5SP201-201ENST00000410316 124 ntBASIC0.99□□□□□ -2.25
TPM1P09493 BTF3P4-201ENST00000418852 495 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.99□□□□□ -2.25
TPM1P09493 AL590135.1-201ENST00000422215 156 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AC019205.3-201ENST00000424573 156 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.99□□□□□ -2.25
TPM1P09493 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.99□□□□□ -2.25
TPM1P09493 AC016700.2-201ENST00000446011 156 ntBASIC0.99□□□□□ -2.25
TPM1P09493 MTCO2P29-201ENST00000465212 189 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AC015911.1-201ENST00000495111 156 ntBASIC0.99□□□□□ -2.25
TPM1P09493 RBBP4P6-201ENST00000508098 202 ntBASIC0.99□□□□□ -2.25
TPM1P09493 MTND3P25-201ENST00000509243 135 ntBASIC0.99□□□□□ -2.25
TPM1P09493 ZNF519P3-201ENST00000557158 1032 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AP005136.1-201ENST00000579765 429 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
TPM1P09493 AC069431.2-201ENST00000604149 1099 ntBASIC0.99□□□□□ -2.25
TPM1P09493 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
TPM1P09493 MTND4P14-201ENST00000435799 1354 ntBASIC0.98□□□□□ -2.25
TPM1P09493 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TPM1P09493 RNU6-43P-201ENST00000384302 107 ntBASIC0.98□□□□□ -2.25
TPM1P09493 RNU6-39P-201ENST00000384344 107 ntBASIC0.98□□□□□ -2.25
TPM1P09493 RNU2-39P-201ENST00000410604 198 ntBASIC0.98□□□□□ -2.25
TPM1P09493 RNU6-607P-201ENST00000411283 108 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.98□□□□□ -2.25
TPM1P09493 CALM2P2-201ENST00000428512 440 ntBASIC0.98□□□□□ -2.25
TPM1P09493 RPL37P21-201ENST00000435890 276 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC244670.1-201ENST00000436879 112 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC007395.1-201ENST00000451333 677 ntBASIC0.98□□□□□ -2.25
TPM1P09493 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.98□□□□□ -2.25
TPM1P09493 RNU7-14P-201ENST00000459331 62 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC010531.2-201ENST00000465012 153 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC117522.1-201ENST00000509821 380 ntBASIC0.98□□□□□ -2.25
TPM1P09493 SNORA31.16-201ENST00000516773 139 ntBASIC0.98□□□□□ -2.25
TPM1P09493 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.98□□□□□ -2.25
TPM1P09493 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
TPM1P09493 HMGN1P30-201ENST00000589286 268 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC073539.2-201ENST00000597113 165 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC107304.1-201ENST00000604229 296 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
TPM1P09493 AC040896.1-201ENST00000613819 479 ntBASIC0.98□□□□□ -2.25
TPM1P09493 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.98□□□□□ -2.25
TPM1P09493 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
TPM1P09493 AL391987.6-201ENST00000305671 199 ntBASIC0.97□□□□□ -2.25
TPM1P09493 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
TPM1P09493 AL117342.1-201ENST00000404861 406 ntBASIC0.97□□□□□ -2.25
TPM1P09493 COX6CP10-201ENST00000416832 224 ntBASIC0.97□□□□□ -2.25
TPM1P09493 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
TPM1P09493 AC013410.2-201ENST00000422627 201 ntBASIC0.97□□□□□ -2.25
TPM1P09493 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TPM1P09493 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.97□□□□□ -2.25
TPM1P09493 AC108667.1-201ENST00000428618 249 ntBASIC0.97□□□□□ -2.25
TPM1P09493 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.97□□□□□ -2.25
TPM1P09493 PRPS1P1-201ENST00000445305 876 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RPS27P1-201ENST00000450552 247 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RN7SL429P-201ENST00000479090 223 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RN7SL489P-201ENST00000486185 223 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RN7SL327P-201ENST00000488659 223 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RNU6-1098P-201ENST00000516772 96 ntBASIC0.97□□□□□ -2.25
TPM1P09493 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.97□□□□□ -2.25
TPM1P09493 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.97□□□□□ -2.25
TPM1P09493 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.97□□□□□ -2.25
TPM1P09493 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
TPM1P09493 RN7SL853P-201ENST00000617250 223 ntBASIC0.97□□□□□ -2.25
TPM1P09493 U3.9-201ENST00000363823 204 ntBASIC0.96□□□□□ -2.26
TPM1P09493 RNU4-1-201ENST00000363925 141 ntBASIC0.96□□□□□ -2.26
TPM1P09493 MIR146A-201ENST00000385201 99 ntBASIC0.96□□□□□ -2.26
TPM1P09493 SNORD115.1-201ENST00000391109 76 ntBASIC0.96□□□□□ -2.26
TPM1P09493 AP1B1P2-201ENST00000416196 106 ntBASIC0.96□□□□□ -2.26
TPM1P09493 AC010975.2-201ENST00000427781 588 ntBASIC0.96□□□□□ -2.26
TPM1P09493 MED13P1-201ENST00000428342 171 ntBASIC0.96□□□□□ -2.26
TPM1P09493 AC000111.3-201ENST00000433478 193 ntBASIC0.96□□□□□ -2.26
TPM1P09493 RPS24P1-201ENST00000438550 371 ntBASIC0.96□□□□□ -2.26
TPM1P09493 HSPE1P13-201ENST00000451143 297 ntBASIC0.96□□□□□ -2.26
TPM1P09493 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.96□□□□□ -2.26
TPM1P09493 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.96□□□□□ -2.26
TPM1P09493 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms