Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SUMO2P18-201ENST00000518873 252 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AP002453.2-201ENST00000533503 320 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 ZNF519P3-201ENST00000557158 1032 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 CYP3A52P-201ENST00000563326 91 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 U4.7-201ENST00000638126 106 ntBASIC0.86□□□□□ -2.27
HLA-DQB2P05538 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQB2P05538 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU6-527P-201ENST00000363425 104 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU4-1-201ENST00000363925 141 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 SNORA63D-201ENST00000364359 132 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU6-157P-201ENST00000383957 107 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU6-39P-201ENST00000384344 107 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU6-809P-201ENST00000384461 107 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU2-7P-201ENST00000410794 178 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 HMGN1P14-201ENST00000412459 517 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 C1DP2-201ENST00000418167 426 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AL591043.1-201ENST00000432461 424 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RPL22P17-201ENST00000438729 315 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 USP9YP25-201ENST00000457708 443 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 HMGN2P9-201ENST00000476875 229 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 MTND3P5-201ENST00000512798 333 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 MIR5697-201ENST00000578045 78 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AC069114.2-201ENST00000604699 304 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HLA-DQB2P05538 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AL157786.1-207ENST00000627771 695 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 AC010615.1-201ENST00000594254 1764 ntBASIC0.85□□□□□ -2.27
HLA-DQB2P05538 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 RNU6-142P-201ENST00000384019 107 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 SNORA24.1-201ENST00000384401 135 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MIR194-1-201ENST00000384892 85 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 SNORA12.2-201ENST00000391040 156 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 SNORD115.1-201ENST00000391109 76 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MIR1276-201ENST00000408707 83 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 RNU2-3P-201ENST00000410144 191 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MTCO3P41-201ENST00000414801 328 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 EBAG9P1-201ENST00000418955 543 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MTCO2P21-201ENST00000419780 677 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MTND1P20-201ENST00000430341 950 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AL031313.1-201ENST00000448435 256 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 snoU13.30-201ENST00000458951 104 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AP005136.1-201ENST00000579765 429 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AC008521.1-201ENST00000587471 187 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AC008752.3-201ENST00000588113 712 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AC073539.2-201ENST00000597113 165 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AL590229.1-201ENST00000603497 542 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 AL139418.1-201ENST00000613613 177 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 MIR8070-201ENST00000616510 88 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 SNORD98-201ENST00000636377 67 ntBASIC0.84□□□□□ -2.27
HLA-DQB2P05538 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RNU6-105P-201ENST00000363909 104 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 MTCYBP2-201ENST00000407745 171 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RNA5SP111-201ENST00000411386 101 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RPL37P21-201ENST00000435890 276 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 SNRPGP7-201ENST00000469016 106 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RBBP4P6-201ENST00000508098 202 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RNA5SP481-201ENST00000516814 122 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 CENPUP1-201ENST00000526649 1202 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 AC110760.3-201ENST00000598794 467 ntBASIC0.83□□□□□ -2.28
HLA-DQB2P05538 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DQB2P05538 OR4G1P-203ENST00000641984 1631 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
HLA-DQB2P05538 Y_RNA.164-201ENST00000363709 102 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 SNORA32.2-201ENST00000384049 122 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU6-636P-201ENST00000384598 107 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU6-331P-201ENST00000384724 107 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU6-1176P-201ENST00000390955 107 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU6-607P-201ENST00000411283 108 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RPS27AP14-201ENST00000422868 454 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC243964.1-201ENST00000441814 261 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 EXOSC3P1-201ENST00000448649 500 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.82□□□□□ -2.28
HLA-DQB2P05538 MTCO2P29-201ENST00000465212 189 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms