Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DPB1P04440 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RNU4-15P-201ENST00000362613 141 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 Y_RNA.77-201ENST00000362962 107 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RNU6-1164P-201ENST00000364428 107 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RNU6-827P-201ENST00000365553 106 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AL512604.1-201ENST00000404812 257 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RPL31P63-201ENST00000422565 375 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AC073415.1-201ENST00000449240 153 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AL031274.1-201ENST00000450334 232 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 PMCHL2-203ENST00000457791 237 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 SNRPFP3-201ENST00000457792 225 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RPL23AP42-201ENST00000471152 471 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 PTP4A1P4-201ENST00000512479 322 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DPB1P04440 MIR449C-201ENST00000516047 92 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 SNORA31.16-201ENST00000516773 139 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DPB1P04440 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AL137161.1-201ENST00000532231 390 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AL034555.1-201ENST00000604816 211 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AC068944.2-201ENST00000610373 403 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 AC090582.1-201ENST00000636321 199 ntBASIC1.47□□□□□ -2.17
HLA-DPB1P04440 SNORD32A-201ENST00000364805 84 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.399-201ENST00000383955 105 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RNU6-1103P-201ENST00000384150 107 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.480-201ENST00000384364 102 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 SNORD14D-201ENST00000384390 87 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 MIR676-201ENST00000390702 67 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RNU6-1158P-201ENST00000391167 107 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 BTF3L4P2-201ENST00000392798 346 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 DEFB108C-201ENST00000400154 252 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RPS29P13-201ENST00000402041 169 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 CYCSP49-201ENST00000420810 319 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC010975.2-201ENST00000427781 588 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AL353689.1-201ENST00000438895 199 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RNU7-63P-201ENST00000459054 62 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RNU7-167P-201ENST00000459160 62 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC079140.3-201ENST00000511111 550 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 MTND3P5-201ENST00000512798 333 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 RNU6-991P-201ENST00000516168 107 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 MIR4299-201ENST00000577899 72 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 BNIP3P16-201ENST00000589779 534 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC073648.5-201ENST00000603502 305 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC091805.2-201ENST00000603848 235 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC025811.1-201ENST00000604312 472 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AC018889.1-201ENST00000605372 397 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 uc_338.5-201ENST00000611839 155 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 SNORD98-201ENST00000636377 67 ntBASIC1.46□□□□□ -2.18
HLA-DPB1P04440 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DPB1P04440 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 RNU6-996P-201ENST00000365438 107 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 RNU6-517P-201ENST00000384362 110 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 MIR504-201ENST00000385065 83 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 RNU6-1245P-201ENST00000411130 106 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 CDK8P2-201ENST00000415020 547 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC073464.1-201ENST00000429823 534 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 SNAP23P1-201ENST00000433229 246 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL360221.1-201ENST00000445989 335 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC145146.1-201ENST00000496370 254 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC093259.1-201ENST00000509755 300 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC091874.1-201ENST00000511402 339 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC109479.2-201ENST00000517842 174 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AP005660.1-201ENST00000522972 293 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 COPS8P3-201ENST00000526024 482 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AP005136.1-201ENST00000579765 429 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AC007684.1-201ENST00000609671 477 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 AL354950.2-201ENST00000617939 290 ntBASIC1.45□□□□□ -2.18
HLA-DPB1P04440 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.45□□□□□ -2.18
HLA-DPB1P04440 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 SNORD32B-201ENST00000364460 84 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RNU5A-6P-201ENST00000384136 116 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
HLA-DPB1P04440 RN7SKP284-201ENST00000411002 343 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms