Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDGFAP04085 RNU6-436P-201ENST00000516171 114 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 RNU6-346P-201ENST00000516288 111 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 SNORA31.21-201ENST00000517180 77 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 MTND5P41-201ENST00000517498 206 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 IFITM8P-201ENST00000522529 394 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 RN7SL703P-201ENST00000578485 302 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 RNU1-30P-201ENST00000606575 163 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 uc_338.14-201ENST00000613162 166 ntBASIC4.01□□□□□ -1.77
PDGFAP04085 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDGFAP04085 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFAP04085 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDGFAP04085 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PDGFAP04085 SNORA18.2-201ENST00000383865 132 ntBASIC4□□□□□ -1.77
PDGFAP04085 Y_RNA.398-201ENST00000383952 99 ntBASIC4□□□□□ -1.77
PDGFAP04085 AP000567.1-201ENST00000406413 156 ntBASIC4□□□□□ -1.77
PDGFAP04085 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4□□□□□ -1.77
PDGFAP04085 RPS29P7-201ENST00000439662 171 ntBASIC4□□□□□ -1.77
PDGFAP04085 AL358232.1-201ENST00000448030 501 ntBASIC4□□□□□ -1.77
PDGFAP04085 RNA5SP519-201ENST00000516480 119 ntBASIC4□□□□□ -1.77
PDGFAP04085 RNU1-117P-201ENST00000517041 158 ntBASIC4□□□□□ -1.77
PDGFAP04085 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4□□□□□ -1.77
PDGFAP04085 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4□□□□□ -1.77
PDGFAP04085 AC015912.2-201ENST00000571053 181 ntBASIC4□□□□□ -1.77
PDGFAP04085 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4□□□□□ -1.77
PDGFAP04085 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4□□□□□ -1.77
PDGFAP04085 AP001485.1-201ENST00000604799 199 ntBASIC4□□□□□ -1.77
PDGFAP04085 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PDGFAP04085 AL359854.1-201ENST00000614203 1594 ntBASIC4□□□□□ -1.77
PDGFAP04085 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4□□□□□ -1.77
PDGFAP04085 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PDGFAP04085 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PDGFAP04085 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDGFAP04085 AC069528.2-201ENST00000624849 1991 ntBASIC4□□□□□ -1.77
PDGFAP04085 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFAP04085 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFAP04085 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFAP04085 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFAP04085 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PDGFAP04085 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PDGFAP04085 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFAP04085 Y_RNA.7-201ENST00000362352 102 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 RNU6-454P-201ENST00000364292 107 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 SNORD87-201ENST00000364849 89 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 RNU4-17P-201ENST00000365598 141 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 RNA5SP252-201ENST00000391131 119 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 RPL21P65-201ENST00000406094 466 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 AC004866.1-201ENST00000411748 78 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFAP04085 TOMM22P2-201ENST00000430735 237 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFAP04085 AC112771.1-201ENST00000463581 102 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFAP04085 RPL36AP48-201ENST00000485521 314 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFAP04085 AL360157.1-201ENST00000565962 87 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 CYP4A43P-201ENST00000568156 121 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 MTND1P7-201ENST00000632801 297 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFAP04085 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFAP04085 MFSD8-242ENST00000641690 4199 ntBASIC3.99□□□□□ -1.77
PDGFAP04085 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFAP04085 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDGFAP04085 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFAP04085 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFAP04085 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFAP04085 FAM35DP-201ENST00000323387 2712 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PDGFAP04085 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
PDGFAP04085 RNU1-75P-201ENST00000347264 129 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 MIR208A-201ENST00000362287 71 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 MIR1183-201ENST00000408856 89 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFAP04085 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFAP04085 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFAP04085 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.98□□□□□ -1.77
PDGFAP04085 RNU2-44P-201ENST00000516795 194 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.98□□□□□ -1.77
PDGFAP04085 MIR4644-201ENST00000579929 84 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFAP04085 AL078604.3-201ENST00000615580 211 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
PDGFAP04085 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFAP04085 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFAP04085 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
PDGFAP04085 AF127577.6-201ENST00000623352 2191 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFAP04085 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFAP04085 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFAP04085 SNORA71.3-201ENST00000362582 128 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 RNU1-14P-201ENST00000362759 152 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 Y_RNA.291-201ENST00000364886 113 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDGFAP04085 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PDGFAP04085 AL138878.1-201ENST00000405131 347 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms