Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 CECR9-201ENST00000453421 199 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 RPL39P38-201ENST00000467018 153 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.27□□□□□ -2.45
POLR1AO95602 AC093534.1-201ENST00000504977 132 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AC008628.1-201ENST00000508663 265 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.27□□□□□ -2.45
POLR1AO95602 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.27□□□□□ -2.45
POLR1AO95602 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.27□□□□□ -2.45
POLR1AO95602 MRPS36P5-201ENST00000551909 298 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AL031281.1-201ENST00000604049 488 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 uc_338.34-201ENST00000617467 174 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 RNA5SP259-201ENST00000365541 109 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 RNU6-877P-201ENST00000383868 107 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.27□□□□□ -2.45
POLR1AO95602 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.27□□□□□ -2.45
POLR1AO95602 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.27□□□□□ -2.45
POLR1AO95602 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 RNU1-131P-201ENST00000458943 161 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 snoU13.30-201ENST00000458951 104 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.27□□□□□ -2.45
POLR1AO95602 AC116347.2-201ENST00000514912 523 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 RNU6-390P-201ENST00000516259 103 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AC010133.1-201ENST00000615809 842 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AL031667.3-201ENST00000620124 655 ntBASIC-0.27□□□□□ -2.45
POLR1AO95602 AL079343.1-201ENST00000572358 1771 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
POLR1AO95602 RNU6-543P-201ENST00000362576 108 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 DHFRP6-201ENST00000401776 268 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 RNU6-77P-201ENST00000410554 91 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 MIR1468-201ENST00000410600 86 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 COX6CP10-201ENST00000416832 224 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.28□□□□□ -2.45
POLR1AO95602 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.28□□□□□ -2.45
POLR1AO95602 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.28□□□□□ -2.45
POLR1AO95602 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.28□□□□□ -2.45
POLR1AO95602 AC010460.2-201ENST00000509054 677 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 AC069113.3-201ENST00000521019 150 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 AL356057.1-201ENST00000533798 831 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 AC090888.2-201ENST00000559765 1144 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 AL132657.2-201ENST00000564417 358 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 VN1R83P-201ENST00000595685 445 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 AP000943.4-201ENST00000622912 357 ntBASIC-0.28□□□□□ -2.45
POLR1AO95602 RNY3P5-201ENST00000384127 102 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
POLR1AO95602 AL355796.1-201ENST00000406706 323 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.29□□□□□ -2.46
POLR1AO95602 MTND1P28-201ENST00000435623 950 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 AC012308.1-201ENST00000451232 178 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.29□□□□□ -2.46
POLR1AO95602 AC074198.2-201ENST00000508153 258 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 RNA5SP437-201ENST00000517249 129 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 AC022523.2-201ENST00000561045 150 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 MIR1248-201ENST00000629190 106 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 AL390237.1-201ENST00000404226 1415 ntBASIC-0.29□□□□□ -2.46
POLR1AO95602 ENSAP3-201ENST00000312710 333 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 MIR525-201ENST00000384978 85 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 MIR548B-201ENST00000385247 97 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 RNA5SP451-201ENST00000410588 110 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 RNA5SP222-201ENST00000411039 105 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.3□□□□□ -2.46
POLR1AO95602 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR1AO95602 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR1AO95602 MTND3P4-201ENST00000453537 303 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 RPL32P14-201ENST00000463196 378 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC011005.2-201ENST00000487324 359 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC011195.1-201ENST00000578177 177 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.3□□□□□ -2.46
POLR1AO95602 VN1R88P-201ENST00000596787 292 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
POLR1AO95602 AC080188.3-201ENST00000624842 748 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 SNORD3E-202ENST00000627253 216 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
POLR1AO95602 MIR520F-201ENST00000384824 87 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 VPS26BP1-201ENST00000417155 755 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 MTND1P20-201ENST00000430341 950 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR1AO95602 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
POLR1AO95602 HMGB1P28-201ENST00000507778 552 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR1AO95602 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR1AO95602 BNIP3P6-201ENST00000549284 499 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 MIR4431-201ENST00000579990 94 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AL590229.1-201ENST00000603497 542 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 7SK.10-201ENST00000621414 298 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC120349.3-201ENST00000624377 529 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 AC100810.6-201ENST00000638068 285 ntBASIC-0.3□□□□□ -2.46
POLR1AO95602 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.31□□□□□ -2.46
POLR1AO95602 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU6-862P-201ENST00000362804 105 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.31□□□□□ -2.46
POLR1AO95602 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms