Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA67.4-201ENST00000384688 142 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AL359511.1-201ENST00000402970 211 ntBASIC2.61□□□□□ -1.99
RTN3O95197 RNA5SP508-201ENST00000411327 119 ntBASIC2.61□□□□□ -1.99
RTN3O95197 ZNF885P-201ENST00000420174 1098 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.61□□□□□ -1.99
RTN3O95197 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AL031659.1-201ENST00000447075 539 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
RTN3O95197 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.61□□□□□ -1.99
RTN3O95197 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.61□□□□□ -1.99
RTN3O95197 MTCYBP18-201ENST00000501056 747 ntBASIC2.61□□□□□ -1.99
RTN3O95197 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.61□□□□□ -1.99
RTN3O95197 AC092436.3-201ENST00000511788 257 ntBASIC2.61□□□□□ -1.99
RTN3O95197 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
RTN3O95197 HSPE1P4-201ENST00000550617 308 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AC026371.1-201ENST00000551867 419 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.61□□□□□ -1.99
RTN3O95197 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AC007014.2-201ENST00000615581 479 ntBASIC2.61□□□□□ -1.99
RTN3O95197 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
RTN3O95197 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RTN3O95197 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
RTN3O95197 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTN3O95197 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN3O95197 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RTN3O95197 AC092268.1-201ENST00000342691 405 ntBASIC2.6□□□□□ -1.99
RTN3O95197 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN3O95197 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
RTN3O95197 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.6□□□□□ -1.99
RTN3O95197 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN3O95197 AL590556.1-201ENST00000423231 483 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AL133396.1-201ENST00000432048 687 ntBASIC2.6□□□□□ -1.99
RTN3O95197 Y_RNA.638-201ENST00000459374 113 ntBASIC2.6□□□□□ -1.99
RTN3O95197 RNU7-66P-201ENST00000459469 62 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN3O95197 HMGB1P35-201ENST00000503360 598 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN3O95197 RPL39P5-202ENST00000512505 151 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.6□□□□□ -1.99
RTN3O95197 RNU6-612P-201ENST00000516909 102 ntBASIC2.6□□□□□ -1.99
RTN3O95197 TRAV32-201ENST00000553993 340 ntBASIC2.6□□□□□ -1.99
RTN3O95197 SCOCP1-201ENST00000554676 349 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.6□□□□□ -1.99
RTN3O95197 AL034555.1-201ENST00000604816 211 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC018889.1-201ENST00000605372 397 ntBASIC2.6□□□□□ -1.99
RTN3O95197 U6atac.1-201ENST00000616025 117 ntBASIC2.6□□□□□ -1.99
RTN3O95197 AC090617.10-201ENST00000624308 134 ntBASIC2.6□□□□□ -1.99
RTN3O95197 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
RTN3O95197 SNORD98-201ENST00000636377 67 ntBASIC2.6□□□□□ -1.99
RTN3O95197 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN3O95197 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN3O95197 RNU4-56P-201ENST00000364700 142 ntBASIC2.59□□□□□ -1.99
RTN3O95197 Y_RNA.414-201ENST00000384011 101 ntBASIC2.59□□□□□ -1.99
RTN3O95197 BTF3L4P2-201ENST00000392798 346 ntBASIC2.59□□□□□ -1.99
RTN3O95197 VN1R36P-201ENST00000414936 291 ntBASIC2.59□□□□□ -1.99
RTN3O95197 AC009963.1-201ENST00000417265 157 ntBASIC2.59□□□□□ -1.99
RTN3O95197 AL513124.1-201ENST00000450410 614 ntBASIC2.59□□□□□ -1.99
RTN3O95197 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN3O95197 RPL9P9-202ENST00000466501 579 ntBASIC2.59□□□□□ -1.99
RTN3O95197 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
RTN3O95197 AC114801.2-201ENST00000503825 781 ntBASIC2.59□□□□□ -1.99
RTN3O95197 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
RTN3O95197 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN3O95197 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN3O95197 AP000907.4-201ENST00000604143 237 ntBASIC2.59□□□□□ -1.99
RTN3O95197 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RTN3O95197 AC002553.4-201ENST00000616896 331 ntBASIC2.59□□□□□ -1.99
RTN3O95197 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.59□□□□□ -1.99
RTN3O95197 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RTN3O95197 RNU6-227P-201ENST00000362865 103 ntBASIC2.58□□□□□ -2
RTN3O95197 RNU6-1252P-201ENST00000363054 104 ntBASIC2.58□□□□□ -2
RTN3O95197 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
RTN3O95197 RNU6-142P-201ENST00000384019 107 ntBASIC2.58□□□□□ -2
RTN3O95197 SNORA26.3-201ENST00000391119 136 ntBASIC2.58□□□□□ -2
RTN3O95197 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.58□□□□□ -2
RTN3O95197 Y_RNA.599-201ENST00000410489 109 ntBASIC2.58□□□□□ -2
RTN3O95197 HMGB3P2-201ENST00000411913 584 ntBASIC2.58□□□□□ -2
RTN3O95197 AL590135.1-201ENST00000422215 156 ntBASIC2.58□□□□□ -2
RTN3O95197 AC019205.3-201ENST00000424573 156 ntBASIC2.58□□□□□ -2
RTN3O95197 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.58□□□□□ -2
RTN3O95197 AC016700.2-201ENST00000446011 156 ntBASIC2.58□□□□□ -2
RTN3O95197 AL139109.1-201ENST00000455491 297 ntBASIC2.58□□□□□ -2
RTN3O95197 AMD1P1-201ENST00000457220 922 ntBASIC2.58□□□□□ -2
RTN3O95197 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
RTN3O95197 AC068781.1-201ENST00000488231 618 ntBASIC2.58□□□□□ -2
RTN3O95197 AC015911.1-201ENST00000495111 156 ntBASIC2.58□□□□□ -2
RTN3O95197 MTCO1P29-201ENST00000496868 288 ntBASIC2.58□□□□□ -2
RTN3O95197 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.58□□□□□ -2
RTN3O95197 AC025465.4-201ENST00000513422 638 ntBASIC2.58□□□□□ -2
RTN3O95197 RNU6-237P-201ENST00000515985 71 ntBASIC2.58□□□□□ -2
RTN3O95197 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
RTN3O95197 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
RTN3O95197 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
RTN3O95197 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.58□□□□□ -2
RTN3O95197 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.58□□□□□ -2
RTN3O95197 SNORA59B-202ENST00000578183 701 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms