Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIR544B-201ENST00000582372 78 ntBASIC0.54□□□□□ -2.32
SNRNP200O75643 AP000860.1-201ENST00000605250 559 ntBASIC0.54□□□□□ -2.32
SNRNP200O75643 AC008945.2-201ENST00000606056 604 ntBASIC0.54□□□□□ -2.32
SNRNP200O75643 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SNRNP200O75643 RNU6-112P-201ENST00000363599 104 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 RNU4-56P-201ENST00000364700 142 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
SNRNP200O75643 RPS3AP36-201ENST00000398190 775 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AL136310.1-201ENST00000404926 654 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 PIGPP2-201ENST00000411569 458 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.53□□□□□ -2.32
SNRNP200O75643 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.53□□□□□ -2.32
SNRNP200O75643 JTBP1-201ENST00000441314 247 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AL583843.1-201ENST00000456070 346 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 USP9YP25-201ENST00000457708 443 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 ADI1P3-201ENST00000549509 470 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.53□□□□□ -2.32
SNRNP200O75643 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.53□□□□□ -2.32
SNRNP200O75643 HMGB1P33-201ENST00000563485 527 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC090517.1-201ENST00000569307 266 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC112191.3-201ENST00000604371 277 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AP000654.2-201ENST00000605633 586 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.53□□□□□ -2.32
SNRNP200O75643 AL391994.1-201ENST00000254724 282 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 snoU2-30.2-201ENST00000362805 70 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 RNU5E-10P-201ENST00000363506 118 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 RNU1-96P-201ENST00000364163 162 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SNRNP200O75643 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.53□□□□□ -2.32
SNRNP200O75643 USP9YP35-201ENST00000435696 412 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AL117351.1-201ENST00000438864 766 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC132479.1-201ENST00000449160 144 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC007547.1-201ENST00000462177 490 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC025465.3-201ENST00000510570 311 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 RNU6-677P-201ENST00000516914 101 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AL356057.1-201ENST00000533798 831 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.53□□□□□ -2.32
SNRNP200O75643 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.53□□□□□ -2.32
SNRNP200O75643 TMF1P1-201ENST00000576058 373 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.53□□□□□ -2.32
SNRNP200O75643 DEFB131E-202ENST00000602581 683 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 MIR3976-201ENST00000606807 139 ntBASIC0.53□□□□□ -2.32
SNRNP200O75643 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SNRNP200O75643 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.53□□□□□ -2.33
SNRNP200O75643 AC092268.1-201ENST00000342691 405 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-621P-201ENST00000364752 109 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-142P-201ENST00000384019 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-910P-201ENST00000390844 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-298P-201ENST00000390888 96 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 Y_RNA.578-201ENST00000390903 88 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RPS20P2-201ENST00000402520 389 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AL117342.1-201ENST00000404861 406 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC006366.1-201ENST00000422002 759 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AC013262.1-201ENST00000426710 252 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 CALM2P2-201ENST00000428512 440 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC116353.3-201ENST00000511215 249 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC016957.1-201ENST00000534895 309 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC004492.1-201ENST00000607036 742 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AL031667.3-201ENST00000620124 655 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
SNRNP200O75643 AL445523.1-201ENST00000451184 1362 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-37P-201ENST00000362692 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-23P-201ENST00000363283 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RNU6-11P-201ENST00000364234 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SNRNP200O75643 MIR508-201ENST00000384857 115 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SNRNP200O75643 ELOCP17-201ENST00000414751 326 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 ELOCP9-201ENST00000418624 239 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RAB28P5-201ENST00000427490 651 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 FTH1P12-201ENST00000432137 551 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 NDUFB1P2-201ENST00000449477 176 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 HSPE1P13-201ENST00000451143 297 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 RPL26P26-201ENST00000480251 434 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AL592221.1-201ENST00000605266 382 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.52□□□□□ -2.33
SNRNP200O75643 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.52□□□□□ -2.33
SNRNP200O75643 RMST_4.1-201ENST00000616886 107 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
SNRNP200O75643 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.52□□□□□ -2.33
SNRNP200O75643 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SNRNP200O75643 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
SNRNP200O75643 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.51□□□□□ -2.33
SNRNP200O75643 EIF1P1-201ENST00000421436 341 ntBASIC0.51□□□□□ -2.33
SNRNP200O75643 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.51□□□□□ -2.33
SNRNP200O75643 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.51□□□□□ -2.33
SNRNP200O75643 AC244670.1-201ENST00000436879 112 ntBASIC0.51□□□□□ -2.33
SNRNP200O75643 AC243964.1-201ENST00000441814 261 ntBASIC0.51□□□□□ -2.33
SNRNP200O75643 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms