Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.58□□□□□ -1.68
PTCD1O75127 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.58□□□□□ -1.68
PTCD1O75127 AL110115.1-201ENST00000614396 364 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 MIR8057-201ENST00000620957 69 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTCD1O75127 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTCD1O75127 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.57□□□□□ -1.68
PTCD1O75127 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTCD1O75127 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTCD1O75127 AL672296.1-201ENST00000427780 2158 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTCD1O75127 SNORD74.4-201ENST00000364129 80 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 RNU6-153P-201ENST00000364422 104 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 RNU6-818P-201ENST00000364837 108 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 SNORD116-18-201ENST00000383961 92 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 SNORA36A-201ENST00000384221 132 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 SNORD63-201ENST00000384262 68 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 MIR186-201ENST00000384988 86 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 AC096638.1-201ENST00000444678 216 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.57□□□□□ -1.68
PTCD1O75127 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.57□□□□□ -1.68
PTCD1O75127 RNA5SP310-201ENST00000459084 116 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 AC016632.1-201ENST00000503994 196 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.57□□□□□ -1.68
PTCD1O75127 AC016256.1-201ENST00000547971 354 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 AC009163.5-201ENST00000575421 637 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 MIR4282-201ENST00000583613 67 ntBASIC4.57□□□□□ -1.68
PTCD1O75127 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTCD1O75127 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTCD1O75127 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTCD1O75127 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.57□□□□□ -1.68
PTCD1O75127 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PTCD1O75127 AC100821.1-201ENST00000523153 2479 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTCD1O75127 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTCD1O75127 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.56□□□□□ -1.68
PTCD1O75127 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTCD1O75127 OTUD4P1-201ENST00000237841 3067 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 Y_RNA.261-201ENST00000364631 102 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTCD1O75127 Y_RNA.568-201ENST00000384742 113 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 MIR93-201ENST00000385024 80 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 Y_RNA.586-201ENST00000391146 98 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 RNU4-30P-201ENST00000410245 143 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 RNU6-1001P-201ENST00000411265 100 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 AL035461.1-201ENST00000421490 332 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 snoU13.6-201ENST00000458785 104 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 AP001324.2-201ENST00000461163 319 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 AC006445.2-201ENST00000510061 472 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 SNORA31.23-201ENST00000517219 133 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 IGKV2-26-201ENST00000518305 343 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.56□□□□□ -1.68
PTCD1O75127 AC108706.1-201ENST00000611053 297 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.56□□□□□ -1.68
PTCD1O75127 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.56□□□□□ -1.68
PTCD1O75127 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTCD1O75127 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
PTCD1O75127 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCD1O75127 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCD1O75127 RNU6-1141P-201ENST00000364520 107 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 Y_RNA.353-201ENST00000365440 108 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 U8.10-201ENST00000384260 133 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 MIR10B-201ENST00000385011 110 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 RNA5SP213-201ENST00000391031 106 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 HMGN2P10-201ENST00000448085 265 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCD1O75127 AC093663.1-201ENST00000497190 394 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 RNU7-110P-201ENST00000516891 62 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCD1O75127 AC012493.2-201ENST00000595083 291 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 AL138963.2-201ENST00000605137 226 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 SNORD113-5-201ENST00000607261 78 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 AL359198.2-201ENST00000611836 194 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 AC091895.1-201ENST00000624494 256 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 MIR3529-201ENST00000637713 78 ntBASIC4.55□□□□□ -1.68
PTCD1O75127 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCD1O75127 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.55□□□□□ -1.68
PTCD1O75127 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCD1O75127 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCD1O75127 CUL1P1-201ENST00000509510 2425 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PTCD1O75127 RNU6-270P-201ENST00000364131 105 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 Y_RNA.441-201ENST00000384123 112 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 RNU6-21P-201ENST00000384710 107 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 MTCO1P5-201ENST00000433573 344 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCD1O75127 AL162725.1-201ENST00000435405 301 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCD1O75127 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCD1O75127 AC114982.1-201ENST00000469402 321 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 RPL30P12-201ENST00000474666 353 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 RPS4XP13-201ENST00000483219 789 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCD1O75127 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCD1O75127 RN7SKP49-201ENST00000516675 260 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 RNU2-31P-201ENST00000516954 155 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 RNU6-58P-201ENST00000517143 103 ntBASIC4.54□□□□□ -1.68
PTCD1O75127 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCD1O75127 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms