Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.37□□□□□ -2.03
SSX4O60224 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AL356157.2-201ENST00000605122 111 ntBASIC2.37□□□□□ -2.03
SSX4O60224 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.37□□□□□ -2.03
SSX4O60224 MIR5739-201ENST00000619803 80 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AL133216.2-202ENST00000634512 349 ntBASIC2.37□□□□□ -2.03
SSX4O60224 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
SSX4O60224 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSX4O60224 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-859P-201ENST00000362728 107 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-227P-201ENST00000362865 103 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU1-112P-201ENST00000364401 164 ntBASIC2.36□□□□□ -2.03
SSX4O60224 Y_RNA.279-201ENST00000364763 95 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-767P-201ENST00000384132 107 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-1072P-201ENST00000384703 107 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-443P-201ENST00000384780 107 ntBASIC2.36□□□□□ -2.03
SSX4O60224 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SSX4O60224 AL360182.1-201ENST00000397433 468 ntBASIC2.36□□□□□ -2.03
SSX4O60224 CBX3P9-201ENST00000402326 552 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AL138827.1-201ENST00000402666 306 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RPL21P111-201ENST00000418453 477 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
SSX4O60224 RPL23AP95-201ENST00000426806 265 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC244670.1-201ENST00000436879 112 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 AL353752.1-201ENST00000454946 260 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC116353.2-201ENST00000505332 712 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU5F-2P-201ENST00000516066 82 ntBASIC2.36□□□□□ -2.03
SSX4O60224 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNU6-566P-201ENST00000516790 107 ntBASIC2.36□□□□□ -2.03
SSX4O60224 RNA5SP454-201ENST00000517231 127 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.36□□□□□ -2.03
SSX4O60224 AP005902.1-201ENST00000521358 186 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC115990.1-201ENST00000526957 301 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC243972.3-201ENST00000539655 198 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX4O60224 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX4O60224 AL138963.2-201ENST00000605137 226 ntBASIC2.36□□□□□ -2.03
SSX4O60224 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSX4O60224 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
SSX4O60224 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSX4O60224 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX4O60224 MIR26A1-201ENST00000362205 77 ntBASIC2.35□□□□□ -2.03
SSX4O60224 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
SSX4O60224 RNU6-933P-201ENST00000384424 107 ntBASIC2.35□□□□□ -2.03
SSX4O60224 BTF3L4P2-201ENST00000392798 346 ntBASIC2.35□□□□□ -2.03
SSX4O60224 RN7SKP61-201ENST00000410642 295 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC138393.2-201ENST00000414742 246 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX4O60224 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX4O60224 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX4O60224 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.35□□□□□ -2.03
SSX4O60224 CKS1BP2-201ENST00000497342 240 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX4O60224 AP005639.2-201ENST00000527592 928 ntBASIC2.35□□□□□ -2.03
SSX4O60224 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.35□□□□□ -2.03
SSX4O60224 ZNF861P-201ENST00000588126 639 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC060766.3-201ENST00000591442 263 ntBASIC2.35□□□□□ -2.03
SSX4O60224 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSX4O60224 AL133215.3-201ENST00000609801 448 ntBASIC2.35□□□□□ -2.03
SSX4O60224 HMGB1P24-202ENST00000615653 685 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AL449363.1-201ENST00000617815 186 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC092608.2-201ENST00000624427 218 ntBASIC2.35□□□□□ -2.03
SSX4O60224 AC090517.3-201ENST00000625170 141 ntBASIC2.35□□□□□ -2.03
SSX4O60224 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX4O60224 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSX4O60224 AC009541.1-201ENST00000438279 2662 ntBASIC2.34□□□□□ -2.03
SSX4O60224 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
SSX4O60224 MIR521-1-201ENST00000384902 87 ntBASIC2.34□□□□□ -2.03
SSX4O60224 OOSP1P1-201ENST00000423265 274 ntBASIC2.34□□□□□ -2.03
SSX4O60224 AL133396.1-201ENST00000432048 687 ntBASIC2.34□□□□□ -2.03
SSX4O60224 PCMTD1P1-201ENST00000455560 355 ntBASIC2.34□□□□□ -2.03
SSX4O60224 PMCHL2-203ENST00000457791 237 ntBASIC2.34□□□□□ -2.03
SSX4O60224 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX4O60224 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
SSX4O60224 AC114801.2-201ENST00000503825 781 ntBASIC2.34□□□□□ -2.03
SSX4O60224 PTP4A1P4-201ENST00000512479 322 ntBASIC2.34□□□□□ -2.03
SSX4O60224 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX4O60224 AC046134.1-201ENST00000514454 666 ntBASIC2.34□□□□□ -2.03
SSX4O60224 Y_RNA.682-201ENST00000516457 100 ntBASIC2.34□□□□□ -2.03
SSX4O60224 AC109329.2-201ENST00000519658 482 ntBASIC2.34□□□□□ -2.03
SSX4O60224 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX4O60224 AL670379.2-201ENST00000604983 252 ntBASIC2.34□□□□□ -2.03
SSX4O60224 MIR3976-201ENST00000606807 139 ntBASIC2.34□□□□□ -2.03
SSX4O60224 SNORD98-201ENST00000636377 67 ntBASIC2.34□□□□□ -2.03
SSX4O60224 AP000560.1-201ENST00000624150 1937 ntBASIC2.34□□□□□ -2.04
SSX4O60224 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
SSX4O60224 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SSX4O60224 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSX4O60224 RNU6-845P-201ENST00000362578 103 ntBASIC2.33□□□□□ -2.04
SSX4O60224 RNU6-790P-201ENST00000384479 105 ntBASIC2.33□□□□□ -2.04
SSX4O60224 Y_RNA.504-201ENST00000384481 104 ntBASIC2.33□□□□□ -2.04
SSX4O60224 RNU2-63P-201ENST00000410792 194 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms