Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
RNF13O43567 SNORA31.16-201ENST00000516773 139 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC106038.2-201ENST00000520706 568 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF13O43567 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.39□□□□□ -2.19
RNF13O43567 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF13O43567 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.39□□□□□ -2.19
RNF13O43567 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
RNF13O43567 SNORA77B-201ENST00000578179 125 ntBASIC1.39□□□□□ -2.19
RNF13O43567 MIR3923-201ENST00000579521 83 ntBASIC1.39□□□□□ -2.19
RNF13O43567 MIR3683-201ENST00000580847 82 ntBASIC1.39□□□□□ -2.19
RNF13O43567 MIR548AB-201ENST00000584917 84 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.39□□□□□ -2.19
RNF13O43567 AC012507.3-201ENST00000603556 477 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC011458.1-201ENST00000604034 617 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC008945.2-201ENST00000606056 604 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC022418.1-201ENST00000624118 445 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AL603839.4-201ENST00000624658 1005 ntBASIC1.39□□□□□ -2.19
RNF13O43567 SEPT14P19-203ENST00000633205 211 ntBASIC1.39□□□□□ -2.19
RNF13O43567 AC092268.1-201ENST00000342691 405 ntBASIC1.38□□□□□ -2.19
RNF13O43567 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
RNF13O43567 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF13O43567 CYCSP49-201ENST00000420810 319 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
RNF13O43567 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 AL022238.1-201ENST00000442557 355 ntBASIC1.38□□□□□ -2.19
RNF13O43567 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.38□□□□□ -2.19
RNF13O43567 RPS27AP8-201ENST00000452665 445 ntBASIC1.38□□□□□ -2.19
RNF13O43567 RPL31P3-201ENST00000458430 332 ntBASIC1.38□□□□□ -2.19
RNF13O43567 SNRPGP7-201ENST00000469016 106 ntBASIC1.38□□□□□ -2.19
RNF13O43567 HMGN1P13-201ENST00000505795 138 ntBASIC1.38□□□□□ -2.19
RNF13O43567 MTCO3P7-201ENST00000510008 774 ntBASIC1.38□□□□□ -2.19
RNF13O43567 ATP5EP1-201ENST00000510257 156 ntBASIC1.38□□□□□ -2.19
RNF13O43567 MTND1P22-201ENST00000510572 951 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
RNF13O43567 SNORD60.2-201ENST00000516883 86 ntBASIC1.38□□□□□ -2.19
RNF13O43567 RNA5SP503-201ENST00000517047 117 ntBASIC1.38□□□□□ -2.19
RNF13O43567 SUMO2P18-201ENST00000518873 252 ntBASIC1.38□□□□□ -2.19
RNF13O43567 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF13O43567 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 AC027807.1-201ENST00000559921 996 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AC109446.1-201ENST00000566172 220 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF13O43567 AC234772.3-201ENST00000602277 528 ntBASIC1.38□□□□□ -2.19
RNF13O43567 AC091805.2-201ENST00000603848 235 ntBASIC1.38□□□□□ -2.19
RNF13O43567 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RNF13O43567 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.38□□□□□ -2.19
RNF13O43567 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RNF13O43567 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RNF13O43567 MTND4P14-201ENST00000435799 1354 ntBASIC1.37□□□□□ -2.19
RNF13O43567 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.37□□□□□ -2.19
RNF13O43567 RNU6-428P-201ENST00000362942 107 ntBASIC1.37□□□□□ -2.19
RNF13O43567 U3.9-201ENST00000363823 204 ntBASIC1.37□□□□□ -2.19
RNF13O43567 RNU6-438P-201ENST00000365561 103 ntBASIC1.37□□□□□ -2.19
RNF13O43567 SNORA32.2-201ENST00000384049 122 ntBASIC1.37□□□□□ -2.19
RNF13O43567 RPL21P111-201ENST00000418453 477 ntBASIC1.37□□□□□ -2.19
RNF13O43567 AC139712.2-201ENST00000424302 339 ntBASIC1.37□□□□□ -2.19
RNF13O43567 RPL23AP95-201ENST00000426806 265 ntBASIC1.37□□□□□ -2.19
RNF13O43567 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
RNF13O43567 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
RNF13O43567 SNAP23P1-201ENST00000433229 246 ntBASIC1.37□□□□□ -2.19
RNF13O43567 SNRPEP8-201ENST00000442866 260 ntBASIC1.37□□□□□ -2.19
RNF13O43567 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.37□□□□□ -2.19
RNF13O43567 MTCO2P6-201ENST00000463134 685 ntBASIC1.37□□□□□ -2.19
RNF13O43567 RPL26P26-201ENST00000480251 434 ntBASIC1.37□□□□□ -2.19
RNF13O43567 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.37□□□□□ -2.19
RNF13O43567 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.37□□□□□ -2.19
RNF13O43567 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
RNF13O43567 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.37□□□□□ -2.19
RNF13O43567 AC107304.1-201ENST00000604229 296 ntBASIC1.37□□□□□ -2.19
RNF13O43567 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.37□□□□□ -2.19
RNF13O43567 AC068205.3-201ENST00000636385 468 ntBASIC1.37□□□□□ -2.19
RNF13O43567 MTND5P10-201ENST00000603719 1809 ntBASIC1.37□□□□□ -2.19
RNF13O43567 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RNF13O43567 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RNF13O43567 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
RNF13O43567 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
RNF13O43567 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RNF13O43567 RNU6-271P-201ENST00000363858 105 ntBASIC1.36□□□□□ -2.19
RNF13O43567 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RNF13O43567 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
RNF13O43567 AC068050.1-201ENST00000394891 380 ntBASIC1.36□□□□□ -2.19
RNF13O43567 AL117339.3-201ENST00000418733 162 ntBASIC1.36□□□□□ -2.19
RNF13O43567 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
RNF13O43567 FTH1P12-201ENST00000432137 551 ntBASIC1.36□□□□□ -2.19
RNF13O43567 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
RNF13O43567 JTBP1-201ENST00000441314 247 ntBASIC1.36□□□□□ -2.19
RNF13O43567 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.36□□□□□ -2.19
RNF13O43567 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF13O43567 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
RNF13O43567 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RNF13O43567 AMD1P1-201ENST00000457220 922 ntBASIC1.36□□□□□ -2.19
RNF13O43567 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
RNF13O43567 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF13O43567 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF13O43567 AC079382.1-201ENST00000493346 557 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms