Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXN3O00409 AC007792.1-201ENST00000623023 402 ntBASIC3.11□□□□□ -1.91
FOXN3O00409 MTND5P30-201ENST00000452896 1731 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXN3O00409 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXN3O00409 MTND5P10-201ENST00000603719 1809 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.1□□□□□ -1.91
FOXN3O00409 Y_RNA.2-201ENST00000362330 96 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 Y_RNA.202-201ENST00000364083 110 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 Y_RNA.504-201ENST00000384481 104 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RNU6-1160P-201ENST00000384546 104 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 MIR181B1-201ENST00000385240 110 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 Y_RNA.594-201ENST00000410373 140 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RNU6-1050P-201ENST00000410388 107 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXN3O00409 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXN3O00409 AL133396.1-201ENST00000432048 687 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 AC236972.1-201ENST00000433225 199 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXN3O00409 ELOCP24-201ENST00000456370 334 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 AC140059.1-201ENST00000489238 361 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 RNA5SP112-201ENST00000515937 99 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 CKS1BP7-201ENST00000522230 235 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXN3O00409 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXN3O00409 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
FOXN3O00409 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXN3O00409 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXN3O00409 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
FOXN3O00409 Y_RNA.459-201ENST00000384251 102 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 DAP3P1-201ENST00000441522 278 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 SNORD5.1-201ENST00000458800 75 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXN3O00409 AIG1P1-201ENST00000503376 148 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXN3O00409 AC026782.1-201ENST00000512952 449 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 Y_RNA.661-201ENST00000516003 99 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 Y_RNA.708-201ENST00000516950 96 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXN3O00409 AP002404.1-201ENST00000532005 451 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 MIR5195-201ENST00000583555 115 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AP000654.2-201ENST00000605633 586 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AL355802.3-201ENST00000607571 545 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 MIR8076-201ENST00000611401 83 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXN3O00409 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.09□□□□□ -1.91
FOXN3O00409 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FOXN3O00409 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
FOXN3O00409 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
FOXN3O00409 Y_RNA.48-201ENST00000362710 103 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 Y_RNA.148-201ENST00000363557 117 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 SNORA9.2-201ENST00000365361 133 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 Y_RNA.395-201ENST00000383945 109 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 RNU6-1222P-201ENST00000384615 107 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 RNU6-331P-201ENST00000384724 107 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 MIR181A2-201ENST00000384863 110 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 AL512633.1-201ENST00000399931 655 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 AP000275.1-201ENST00000411943 390 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN3O00409 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 RPL23AP50-201ENST00000434149 455 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN3O00409 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXN3O00409 AL137792.2-201ENST00000443484 235 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN3O00409 AC073901.1-201ENST00000462471 408 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 RN7SKP295-201ENST00000517264 153 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXN3O00409 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXN3O00409 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN3O00409 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXN3O00409 HMGB1P24-202ENST00000615653 685 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 AC007485.1-201ENST00000616755 206 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.08□□□□□ -1.92
FOXN3O00409 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FOXN3O00409 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXN3O00409 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXN3O00409 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXN3O00409 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN3O00409 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXN3O00409 Y_RNA.40-201ENST00000362645 93 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 RNU6-486P-201ENST00000363116 107 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 SNORA68.1-201ENST00000364537 132 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 RNU6-596P-201ENST00000365395 98 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 U8.8-201ENST00000365399 135 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN3O00409 RNU6-1040P-201ENST00000383974 107 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 MIR512-1-201ENST00000384913 84 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 MIR186-201ENST00000384988 86 ntBASIC3.07□□□□□ -1.92
FOXN3O00409 AL138885.1-201ENST00000405921 675 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms