Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC107304.1-201ENST00000604229 296 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AL022161.1-201ENST00000604390 213 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK1AO00322 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK1AO00322 AC104073.3-201ENST00000610942 955 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC091304.9-201ENST00000612091 226 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC120349.3-201ENST00000624377 529 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 LINC02555-201ENST00000563933 1951 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RNU4-15P-201ENST00000362613 141 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RNU6-438P-201ENST00000365561 103 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RNU6-142P-201ENST00000384019 107 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RNU6-439P-201ENST00000384188 106 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RNU6-482P-201ENST00000391068 107 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1AO00322 BTF3P4-201ENST00000418852 495 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK1AO00322 AC244670.1-201ENST00000436879 112 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC079781.2-201ENST00000446424 169 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 FTH1P25-201ENST00000447665 469 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK1AO00322 AC130509.1-201ENST00000464158 433 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 RAP1BP2-201ENST00000478270 544 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC025465.3-201ENST00000510570 311 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1AO00322 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK1AO00322 AC084364.2-201ENST00000546924 395 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1AO00322 AC110760.3-201ENST00000598794 467 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK1AO00322 Z99289.3-201ENST00000605586 594 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 AC008250.2-201ENST00000615261 205 ntBASIC1.17□□□□□ -2.22
UPK1AO00322 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UPK1AO00322 Y_RNA.67-201ENST00000362870 100 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 RNU6-414P-201ENST00000363705 104 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 SNORD114-6-201ENST00000364393 72 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 SNORD32B-201ENST00000364460 84 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 Y_RNA.367-201ENST00000365544 101 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK1AO00322 MTCO3P41-201ENST00000414801 328 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 Z99497.1-201ENST00000421282 135 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AL590135.1-201ENST00000422215 156 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC019205.3-201ENST00000424573 156 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 GPR143P-201ENST00000434155 205 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC243964.1-201ENST00000441814 261 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC016700.2-201ENST00000446011 156 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 snoU13.9-201ENST00000458927 103 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC010409.1-201ENST00000487382 476 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK1AO00322 AC015911.1-201ENST00000495111 156 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK1AO00322 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.16□□□□□ -2.22
UPK1AO00322 AC090572.1-201ENST00000519251 160 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 VN1R80P-201ENST00000597126 338 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC234772.3-201ENST00000602277 528 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AP001485.1-201ENST00000604799 199 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC090578.1-201ENST00000604955 591 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC027449.1-201ENST00000608890 407 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 AC011155.2-201ENST00000623202 216 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 MTND4P4-201ENST00000439033 1366 ntBASIC1.16□□□□□ -2.22
UPK1AO00322 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
UPK1AO00322 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
UPK1AO00322 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 RNU6-1141P-201ENST00000364520 107 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 RNU6-715P-201ENST00000365204 103 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 Y_RNA.332-201ENST00000365271 113 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 RNU6-43P-201ENST00000384302 107 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 Y_RNA.560-201ENST00000384689 102 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK1AO00322 RNU2-41P-201ENST00000410991 178 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 RPS3AP3-201ENST00000411933 242 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 HIGD1AP15-201ENST00000416198 280 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPK1AO00322 MTND2P4-201ENST00000445034 1004 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1AO00322 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPK1AO00322 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1AO00322 RNU7-182P-201ENST00000459009 62 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC005908.1-201ENST00000468701 347 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1AO00322 RNA5SP503-201ENST00000517047 117 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPK1AO00322 SUMO2P18-201ENST00000518873 252 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 COPS8P3-201ENST00000526024 482 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC087441.2-201ENST00000529141 262 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.15□□□□□ -2.23
UPK1AO00322 AC023050.3-201ENST00000541142 333 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 RRN3P3-201ENST00000549207 578 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 SUB1P4-201ENST00000566062 339 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC109446.1-201ENST00000566172 220 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 MIR5094-201ENST00000578766 85 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 MIR4422-201ENST00000581938 83 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1AO00322 AC090616.2-202ENST00000584248 222 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 MIR548AB-201ENST00000584917 84 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms