Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNORA11.2-201ENST00000408318 127 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.94□□□□□ -2.1
PDLIM1O00151 RPS20P15-201ENST00000412792 311 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.94□□□□□ -2.1
PDLIM1O00151 EDDM3CP-201ENST00000415977 425 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AL139415.2-201ENST00000431968 163 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 RPL32P28-201ENST00000443577 397 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC013470.1-201ENST00000453438 462 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.94□□□□□ -2.1
PDLIM1O00151 SNORA4.4-201ENST00000515921 135 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU6-1281P-201ENST00000516223 105 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU6-506P-201ENST00000516553 94 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU6-835P-201ENST00000516974 104 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 SNORA31.25-201ENST00000517242 134 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 CENPUP1-201ENST00000526649 1202 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC115990.1-201ENST00000526957 301 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.94□□□□□ -2.1
PDLIM1O00151 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.94□□□□□ -2.1
PDLIM1O00151 BNIP3P16-201ENST00000589779 534 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.94□□□□□ -2.1
PDLIM1O00151 AC012557.2-201ENST00000605919 418 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 AC241585.2-209ENST00000638217 143 ntBASIC1.94□□□□□ -2.1
PDLIM1O00151 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.94□□□□□ -2.1
PDLIM1O00151 RNU6-82P-201ENST00000363970 107 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 Y_RNA.378-201ENST00000365652 113 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 RNU6-483P-201ENST00000384088 108 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 RNU6-1274P-201ENST00000384557 107 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 RNU6-780P-201ENST00000391030 104 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AL590002.1-201ENST00000406554 418 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AL117339.3-201ENST00000418733 162 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AL590556.1-201ENST00000423231 483 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.93□□□□□ -2.1
PDLIM1O00151 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.93□□□□□ -2.1
PDLIM1O00151 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.93□□□□□ -2.1
PDLIM1O00151 MTND3P16-201ENST00000452205 344 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AL353752.1-201ENST00000454946 260 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 RNU7-138P-201ENST00000459479 64 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC019235.1-201ENST00000503847 207 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC091885.1-201ENST00000506658 268 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 SCARNA16.3-201ENST00000516595 184 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.93□□□□□ -2.1
PDLIM1O00151 COPS8P3-201ENST00000526024 482 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.93□□□□□ -2.1
PDLIM1O00151 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.93□□□□□ -2.1
PDLIM1O00151 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.93□□□□□ -2.1
PDLIM1O00151 AC010928.2-201ENST00000588017 287 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 ELOCP5-201ENST00000604924 333 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC092954.2-201ENST00000609103 430 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
PDLIM1O00151 AC063943.3-201ENST00000615562 356 ntBASIC1.93□□□□□ -2.1
PDLIM1O00151 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
PDLIM1O00151 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PDLIM1O00151 RNU6-648P-201ENST00000410190 107 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 RNU6-1068P-201ENST00000410958 103 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 RNU2-32P-201ENST00000411193 191 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM1O00151 AL589823.1-201ENST00000429577 183 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.92□□□□□ -2.1
PDLIM1O00151 SEPT14P3-201ENST00000439401 183 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AL732372.2-207ENST00000445840 183 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 SEPT14P2-201ENST00000453405 183 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.92□□□□□ -2.1
PDLIM1O00151 ANXA2P1-201ENST00000505539 926 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 SEPT14P4-201ENST00000513445 186 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 RNU6-323P-201ENST00000521915 107 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 FO082796.1-201ENST00000523795 183 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.92□□□□□ -2.1
PDLIM1O00151 AL118558.2-201ENST00000556294 238 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 HMGB1P33-201ENST00000563485 527 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AL162413.1-201ENST00000603198 110 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AL357078.3-201ENST00000607528 618 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AF250324.2-201ENST00000608299 610 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 AC103705.1-201ENST00000619013 241 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 YWHAEP7-203ENST00000622054 312 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
PDLIM1O00151 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PDLIM1O00151 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PDLIM1O00151 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PDLIM1O00151 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PDLIM1O00151 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 RNU4-20P-201ENST00000365601 151 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.91□□□□□ -2.1
PDLIM1O00151 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 RNU6-43P-201ENST00000384302 107 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 MIR29B2-201ENST00000385055 81 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 SNORD73A-201ENST00000386062 65 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PDLIM1O00151 RPS29P13-201ENST00000402041 169 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 ARL5AP1-201ENST00000418991 388 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
PDLIM1O00151 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.91□□□□□ -2.1
PDLIM1O00151 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.91□□□□□ -2.1
PDLIM1O00151 AC096638.1-201ENST00000444678 216 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms