Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC012640.5-201ENST00000623897 319 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC188H7C350 AC068137.3-201ENST00000639191 341 ntBASIC2.23□□□□□ -2.05
CCDC188H7C350 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC188H7C350 RNU6-214P-201ENST00000384130 107 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 EIF4E2P1-201ENST00000393781 255 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 MIR1261-201ENST00000408659 82 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC188H7C350 RNU4-26P-201ENST00000410270 107 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 SNAP23P1-201ENST00000433229 246 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 ERLEC1P1-201ENST00000433806 578 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC188H7C350 GPM6BP3-201ENST00000442797 145 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC188H7C350 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC188H7C350 U8.21-201ENST00000459536 136 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC145146.1-201ENST00000496370 254 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 RPL38P4-201ENST00000502376 214 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 HMGB1P35-201ENST00000503360 598 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC016632.1-201ENST00000503994 196 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 RPL39P5-202ENST00000512505 151 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 SCARNA16.3-201ENST00000516595 184 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC022616.8-201ENST00000533569 253 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC188H7C350 TRAV32-201ENST00000553993 340 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC010525.2-201ENST00000590920 195 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC188H7C350 AF250324.2-201ENST00000608299 610 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
CCDC188H7C350 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC188H7C350 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC188H7C350 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CCDC188H7C350 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CCDC188H7C350 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC188H7C350 AC009541.1-201ENST00000438279 2662 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC188H7C350 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC188H7C350 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 Y_RNA.373-201ENST00000365600 103 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 RNU6-933P-201ENST00000384424 107 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 MTCO1P20-201ENST00000425366 358 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 USP9YP18-201ENST00000425912 695 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 MTCO2P3-201ENST00000442543 421 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AL137159.1-201ENST00000452808 512 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC188H7C350 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC188H7C350 RNU6-1037P-201ENST00000459571 107 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC188H7C350 AC107032.1-201ENST00000485945 480 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC022447.4-201ENST00000504053 364 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 RNU6-1332P-201ENST00000516666 104 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC107953.1-201ENST00000522216 297 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC016957.1-201ENST00000534895 309 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 MIR5692C1-201ENST00000585309 91 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 AC078899.2-201ENST00000595282 212 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC188H7C350 SNRPGP17-201ENST00000603780 214 ntBASIC2.21□□□□□ -2.06
CCDC188H7C350 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CCDC188H7C350 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC188H7C350 AC009487.4-201ENST00000624969 3585 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AC092268.1-201ENST00000342691 405 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 RNU6-1285P-201ENST00000363480 105 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 RNU6-1090P-201ENST00000364065 94 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 MIR181A1-201ENST00000385026 110 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC188H7C350 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC188H7C350 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC188H7C350 MTND3P21-201ENST00000433774 331 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC188H7C350 UBL5P3-201ENST00000475112 231 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AC083904.1-201ENST00000487828 231 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 YWHAEP4-201ENST00000505390 198 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 RNU6-1069P-201ENST00000516612 133 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 HSPE1P18-201ENST00000517602 280 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 MTND1P35-201ENST00000526739 508 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AP005597.4-201ENST00000526762 229 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AC109635.3-201ENST00000529536 185 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AK6P1-201ENST00000540219 478 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC188H7C350 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC188H7C350 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AP001836.1-201ENST00000604675 523 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AL356157.2-201ENST00000605122 111 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 FER-210ENST00000628534 558 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC188H7C350 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 AP000560.1-201ENST00000624150 1937 ntBASIC2.2□□□□□ -2.06
CCDC188H7C350 Y_RNA.9-201ENST00000362354 101 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 RNU4-12P-201ENST00000365233 139 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 MIR514A2-201ENST00000385131 88 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 MIR514A3-201ENST00000385132 88 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
CCDC188H7C350 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC188H7C350 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC188H7C350 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms