Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 SUB1P2-201ENST00000556401 297 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 MIR3618-201ENST00000580330 88 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.15-201ENST00000611544 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.16-201ENST00000613119 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.12-201ENST00000613778 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.20-201ENST00000613956 192 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.9-201ENST00000615427 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.11-201ENST00000616345 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.2-201ENST00000616535 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.3-201ENST00000617785 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.19-201ENST00000618602 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 RNU2-1-201ENST00000618664 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.6-201ENST00000619225 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.5-201ENST00000619465 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 U2.10-201ENST00000620268 191 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.3□□□□□ -2.2
SMKR1H3BMG3 AL136360.1-201ENST00000503377 1900 ntBASIC1.3□□□□□ -2.2
SMKR1H3BMG3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MTCO2P11-201ENST00000431069 680 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC003989.2-201ENST00000440224 169 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MTCO1P44-201ENST00000441935 243 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AL356010.1-201ENST00000456364 102 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AP001486.1-201ENST00000463339 476 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC008628.2-201ENST00000502605 298 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 RNU6-567P-201ENST00000516746 107 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC021231.3-201ENST00000558497 370 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 CYP4A27P-201ENST00000567218 190 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MIR3913-1-201ENST00000577744 102 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MIR5094-201ENST00000578766 85 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 RPL17P51-201ENST00000605218 238 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AC109347.2-201ENST00000610220 349 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AL450472.1-202ENST00000637286 180 ntBASIC1.29□□□□□ -2.2
SMKR1H3BMG3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.29□□□□□ -2.2
SMKR1H3BMG3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 SNORD31B-201ENST00000364977 69 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 MIR491-201ENST00000384877 84 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 SNORA12.2-201ENST00000391040 156 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 RNU6-903P-201ENST00000391270 109 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AL445646.1-201ENST00000431784 216 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 MTND4P32-201ENST00000437189 1237 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AL031667.1-201ENST00000440222 725 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 RNU7-14P-201ENST00000459331 62 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 TOMM22P6-201ENST00000465035 409 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 MTND3P7-201ENST00000474435 343 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC010486.2-201ENST00000505572 483 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC091874.1-201ENST00000511402 339 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 SUMO2P18-201ENST00000518873 252 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 LRRC34P1-201ENST00000542742 915 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 Z98751.3-201ENST00000604447 521 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 AC008536.2-201ENST00000607284 349 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 U2.17-201ENST00000611454 95 ntBASIC1.28□□□□□ -2.2
SMKR1H3BMG3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMKR1H3BMG3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.169-201ENST00000363745 96 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 RNU6-517P-201ENST00000384362 110 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 RPL17P50-201ENST00000396131 546 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 MTATP6P18-201ENST00000417994 673 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AL357134.1-201ENST00000445848 426 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 RPS27AP8-201ENST00000452665 445 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 snoU13.9-201ENST00000458927 103 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC114801.2-201ENST00000503825 781 ntBASIC1.27□□□□□ -2.21
SMKR1H3BMG3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.27□□□□□ -2.21
SMKR1H3BMG3 RNU6-970P-201ENST00000516312 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms