Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RNU6-612P-201ENST00000516909 102 ntBASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 RN7SKP299-201ENST00000606679 301 ntBASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC064836.2-201ENST00000609491 462 ntBASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 AC092608.2-201ENST00000624427 218 ntBASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB1P1B2RPK0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 RNU4-66P-201ENST00000365199 138 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 HMGB1P18-201ENST00000438801 619 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 TPT1P7-201ENST00000458300 517 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 RPL31P3-201ENST00000458430 332 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 HMGB1P29-201ENST00000505659 499 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC079140.3-201ENST00000511111 550 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC008834.1-201ENST00000511612 175 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 RNU6-189P-201ENST00000516120 101 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AP005597.4-201ENST00000526762 229 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AL118558.2-201ENST00000556294 238 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 MTND1P15-201ENST00000579262 949 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 MIR4285-201ENST00000581001 85 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 MIR4424-201ENST00000585257 86 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC087683.1-201ENST00000591187 441 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC010900.2-201ENST00000604508 210 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AL357078.3-201ENST00000607528 618 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AL121757.2-201ENST00000611223 313 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 AC083806.3-201ENST00000614016 455 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.25□□□□□ -2.05
HMGB1P1B2RPK0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 SNORA18.2-201ENST00000383865 132 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 SNORA44-201ENST00000384584 132 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 DEFB108C-201ENST00000400154 252 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 RN7SKP27-201ENST00000410684 333 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 RNU1-131P-201ENST00000458943 161 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 AC091435.1-201ENST00000505442 584 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 SUB1P4-201ENST00000566062 339 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 MIR8057-201ENST00000620957 69 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HMGB1P1B2RPK0 Y_RNA.77-201ENST00000362962 107 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AL033519.2-201ENST00000403958 392 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 CDK8P2-201ENST00000415020 547 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AC027124.2-201ENST00000428249 105 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 RPL7P54-201ENST00000438336 674 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 SNORD109B-201ENST00000458961 67 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 SNORD109A-201ENST00000459128 67 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AP001486.1-201ENST00000463339 476 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 RPS23P5-201ENST00000495419 428 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 SUMO2P18-201ENST00000518873 252 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 HMGB1P33-201ENST00000563485 527 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AC034105.4-201ENST00000568304 277 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 MIR3158-1-201ENST00000583596 81 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 MIR3611-201ENST00000584484 83 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AC116312.1-201ENST00000606841 314 ntBASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.23□□□□□ -2.05
HMGB1P1B2RPK0 AL159152.1-201ENST00000635019 2587 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 RNA5SP160-201ENST00000364866 120 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 MIR134-201ENST00000385258 73 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AL445685.2-201ENST00000422551 342 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 MTCO3P46-201ENST00000425787 232 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 BX510359.1-201ENST00000456973 237 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 RNU6-1037P-201ENST00000459571 107 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AC096745.1-201ENST00000509945 370 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 SNORA40.12-201ENST00000516329 111 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 CBX3P4-201ENST00000538909 354 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms