Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 RNU1-117P-201ENST00000517041 158 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 MTND4LP26-201ENST00000518144 282 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 AC004217.3-201ENST00000551552 878 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 AC068620.3-201ENST00000602749 560 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 MIR8064-201ENST00000612863 90 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 AL590396.4-201ENST00000636779 956 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 RNY1-201ENST00000364228 113 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 SNORA51.6-201ENST00000384151 125 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 RNU6-878P-201ENST00000384578 110 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 AL139396.1-201ENST00000421137 167 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 MTCO2P1-201ENST00000424648 477 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 AC002486.1-201ENST00000435098 391 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 MTND1P30-201ENST00000441241 901 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 RNU6-840P-201ENST00000517275 65 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 AF235103.2-201ENST00000525753 346 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 AL592221.1-201ENST00000605266 382 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.81□□□□□ -2.54
LINC01549A6NIU2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 MIR593-201ENST00000384856 100 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 RNA5SP127-201ENST00000411051 133 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 C1DP2-201ENST00000418167 426 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 AC073910.1-201ENST00000445047 438 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 C1DP4-201ENST00000455429 424 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 MTND5P13-201ENST00000513046 1079 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 AC080078.2-201ENST00000603766 501 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 AC243773.3-201ENST00000613270 256 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 AL163051.2-201ENST00000618976 735 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 AL596245.1-201ENST00000618994 362 ntBASIC-0.82□□□□□ -2.54
LINC01549A6NIU2 SNORA9.1-201ENST00000362412 131 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 SNORA4.2-201ENST00000365313 147 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 RNU6-756P-201ENST00000383997 107 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 MTND4LP16-201ENST00000440828 295 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 RNU7-34P-201ENST00000459394 64 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 SNORD126-201ENST00000459475 77 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 SUB1P2-201ENST00000556401 297 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AC131055.1-201ENST00000584626 316 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AC022022.2-201ENST00000602989 360 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AC011374.2-201ENST00000607135 526 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 AC015726.2-201ENST00000620112 122 ntBASIC-0.83□□□□□ -2.54
LINC01549A6NIU2 RNU6-655P-201ENST00000362858 107 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 RNA5SP517-201ENST00000364724 117 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 CBX3P9-201ENST00000402326 552 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 PSMA6P3-201ENST00000428242 164 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 GTF2IP3-201ENST00000433887 494 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 OR6C5P-201ENST00000452388 923 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 AL583843.1-201ENST00000456070 346 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 AC114981.1-201ENST00000503897 678 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 RNU6-947P-201ENST00000516264 106 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 AC109810.1-201ENST00000534066 224 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 AC098483.2-201ENST00000603158 454 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 FTX_2.1-201ENST00000618816 94 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.84□□□□□ -2.54
LINC01549A6NIU2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 RNU6-654P-201ENST00000364373 107 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 RNU6-923P-201ENST00000364753 107 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 MIR329-2-201ENST00000385029 84 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 MIR1287-201ENST00000408492 90 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 TAF13P2-201ENST00000416876 286 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 RPL39P39-201ENST00000455840 151 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 RNA5SP330-201ENST00000517096 96 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 AC093788.1-201ENST00000609356 927 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 uc_338.36-201ENST00000622331 158 ntBASIC-0.85□□□□□ -2.55
LINC01549A6NIU2 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 MIR18A-201ENST00000362310 71 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 RNU6-862P-201ENST00000362804 105 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 AC068533.2-201ENST00000411872 306 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 AC008628.1-201ENST00000508663 265 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms