Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 AL133475.1-201ENST00000404414 305 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 AL606753.1-201ENST00000427435 87 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 AP001324.2-201ENST00000461163 319 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 AC055872.1-201ENST00000570978 278 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 MZT1P2-201ENST00000604387 248 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 U6.106-201ENST00000636360 105 ntBASIC4.56□□□□□ -1.68
PALM3A6NDB9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PALM3A6NDB9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PALM3A6NDB9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PALM3A6NDB9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PALM3A6NDB9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PALM3A6NDB9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 RNU6-1310P-201ENST00000384153 107 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 RNU6-750P-201ENST00000390946 107 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 RNU6-918P-201ENST00000391219 106 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 CBX3P9-201ENST00000402326 552 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 Y_RNA.597-201ENST00000410463 100 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.55□□□□□ -1.68
PALM3A6NDB9 TMSB4XP3-201ENST00000445144 114 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.55□□□□□ -1.68
PALM3A6NDB9 snoU13.14-201ENST00000459372 104 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.55□□□□□ -1.68
PALM3A6NDB9 RNY3P16-201ENST00000516338 101 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 MIR1254-2-201ENST00000579553 63 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 AL354798.1-201ENST00000622505 329 ntBASIC4.55□□□□□ -1.68
PALM3A6NDB9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PALM3A6NDB9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PALM3A6NDB9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PALM3A6NDB9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.54□□□□□ -1.68
PALM3A6NDB9 Y_RNA.170-201ENST00000363746 110 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 Y_RNA.308-201ENST00000365043 101 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 SNORA18.3-201ENST00000384122 132 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 MIR549A-201ENST00000385268 96 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AP000567.1-201ENST00000406413 156 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC009237.7-201ENST00000447357 229 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 SNORD2.1-201ENST00000458762 69 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC091021.1-201ENST00000468051 388 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.54□□□□□ -1.68
PALM3A6NDB9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.54□□□□□ -1.68
PALM3A6NDB9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC027176.1-201ENST00000560204 514 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC025281.1-201ENST00000567026 265 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 MIR4727-201ENST00000622232 55 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 AC008725.1-201ENST00000605123 2263 ntBASIC4.54□□□□□ -1.68
PALM3A6NDB9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.54□□□□□ -1.68
PALM3A6NDB9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PALM3A6NDB9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PALM3A6NDB9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PALM3A6NDB9 ZNF962P-201ENST00000443465 3140 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 RNU6-799P-201ENST00000363567 107 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 SNORD74.4-201ENST00000364129 80 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 U1.1-201ENST00000384101 164 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 AC024067.1-201ENST00000426199 223 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.53□□□□□ -1.68
PALM3A6NDB9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.53□□□□□ -1.68
PALM3A6NDB9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PALM3A6NDB9 AC092593.1-201ENST00000515413 1815 ntBASIC4.53□□□□□ -1.68
PALM3A6NDB9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PALM3A6NDB9 AL136164.4-201ENST00000625013 2135 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PALM3A6NDB9 Y_RNA.240-201ENST00000364469 95 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 MIR199A2-201ENST00000385289 110 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 IFNA11P-201ENST00000446352 526 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AC091179.3-201ENST00000474761 144 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 RPS29P26-201ENST00000477483 171 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 RN7SL323P-201ENST00000494712 295 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AC146944.2-203ENST00000502493 354 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AC139495.1-202ENST00000513164 354 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 SCARNA14-201ENST00000516903 136 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AP005660.1-201ENST00000522972 293 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AL391813.1-201ENST00000603098 260 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 AC004467.1-201ENST00000615678 330 ntBASIC4.52□□□□□ -1.69
PALM3A6NDB9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.52□□□□□ -1.69
PALM3A6NDB9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PALM3A6NDB9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PALM3A6NDB9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.51□□□□□ -1.69
PALM3A6NDB9 AF127577.6-201ENST00000623352 2191 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.51□□□□□ -1.69
PALM3A6NDB9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PALM3A6NDB9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PALM3A6NDB9 RNA5SP295-201ENST00000362655 121 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 Y_RNA.101-201ENST00000363154 102 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 RNU6-529P-201ENST00000363383 104 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 RNA5SP240-201ENST00000365355 128 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 MIR548I2-201ENST00000408348 149 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 RNA5SP306-201ENST00000411087 107 ntBASIC4.51□□□□□ -1.69
PALM3A6NDB9 RAB28P5-201ENST00000427490 651 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms