Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 SNORD53-201ENST00000579969 78 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC090897.2-201ENST00000581715 130 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC044792.1-201ENST00000593294 196 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AL356157.2-201ENST00000605122 111 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 MIR6817-201ENST00000615588 66 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RNU6-859P-201ENST00000362728 107 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 U3.6-201ENST00000363622 211 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RNU6-890P-201ENST00000384121 107 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AL133475.1-201ENST00000404414 305 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RNU6-174P-201ENST00000410406 106 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 EIF4EP2-201ENST00000422816 654 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 MTCO2P12-201ENST00000427426 682 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AP001324.2-201ENST00000461163 319 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 SNRPGP7-201ENST00000469016 106 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC027575.1-201ENST00000481064 460 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 ANXA2P1-201ENST00000505539 926 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC005741.1-201ENST00000511094 432 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 Y_RNA.701-201ENST00000516812 110 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC093249.1-201ENST00000567049 203 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RPL23AP78-201ENST00000599928 470 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 CYP2C61P-201ENST00000604072 290 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 uc_338.14-201ENST00000613162 166 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM43BA6NCK2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 RNU6-622P-201ENST00000384272 103 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 MIR9-1-201ENST00000385198 89 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 SNORA75.6-201ENST00000391318 127 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 FO393415.2-201ENST00000480085 343 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 SCARNA16.2-201ENST00000516520 172 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 RNA5SP148-201ENST00000516527 94 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 RPS15AP11-201ENST00000594193 385 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AC007792.1-201ENST00000623023 402 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 AC092608.2-201ENST00000624427 218 ntBASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM43BA6NCK2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 MTND5P9-201ENST00000503854 1755 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RNU6-331P-201ENST00000384724 107 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 BX276092.3-201ENST00000424182 230 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AC007677.1-201ENST00000445757 515 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RPL39P29-201ENST00000447779 157 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 snoU13.15-201ENST00000459407 104 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RPL30P12-201ENST00000474666 353 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RNA5SP384-201ENST00000516615 116 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 RNU6-264P-201ENST00000517134 104 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 AL356055.1-201ENST00000602528 446 ntBASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43BA6NCK2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 SNORD114-19-201ENST00000363072 75 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 U8.2-201ENST00000363156 134 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 SNORA3.2-201ENST00000408221 125 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AL031659.1-201ENST00000447075 539 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AP002770.2-201ENST00000543613 532 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms