Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 RPS20P10-201ENST00000451209 253 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 MTCYBP1-201ENST00000454315 1119 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 Y_RNA.676-201ENST00000516393 96 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 SUMO2P16-201ENST00000519475 264 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 Z83818.1-201ENST00000603584 150 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 Z69720.2-201ENST00000624755 279 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 MTND5P42-201ENST00000637720 498 ntBASIC0.14□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU5B-1-201ENST00000363286 116 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-395P-201ENST00000365662 106 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC083799.1-201ENST00000366451 910 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-1-201ENST00000383898 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-42P-201ENST00000384165 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-36P-201ENST00000384172 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-4P-201ENST00000384205 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-5P-201ENST00000384238 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-3P-201ENST00000384314 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-2-201ENST00000384627 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-9-201ENST00000384776 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-33P-201ENST00000384793 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 SNORA12.2-201ENST00000391040 156 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 SNORA12-201ENST00000391162 147 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 FCF1P10-201ENST00000407590 479 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 Y_RNA.623-201ENST00000411128 95 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AL122001.1-201ENST00000457027 370 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC105758.1-201ENST00000506038 399 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC010587.2-201ENST00000511727 448 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RN7SKP12-201ENST00000516275 143 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-914P-201ENST00000516749 109 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 ZNF92P2-201ENST00000600543 1059 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 KC877982.1-201ENST00000602313 470 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC018889.1-201ENST00000605372 397 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-6P-201ENST00000606623 107 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 AC231657.1-201ENST00000624313 397 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 SNORD3E-202ENST00000627253 216 ntBASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV12-3A0A0B4J271 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU1-139P-201ENST00000391307 165 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 RPL23AP95-201ENST00000426806 265 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC233266.1-201ENST00000454518 96 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC010468.3-201ENST00000508225 458 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-1102P-201ENST00000516149 96 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 MIR4742-201ENST00000581069 85 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 HMGN1P30-201ENST00000589286 268 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AL031281.1-201ENST00000604049 488 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC012557.2-201ENST00000605919 418 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC092106.3-201ENST00000611308 722 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC242852.1-201ENST00000612151 96 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC009509.4-201ENST00000619202 509 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 AC244015.1-201ENST00000622301 99 ntBASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV12-3A0A0B4J271 MTND5P33-201ENST00000571250 1450 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU4-15P-201ENST00000362613 141 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-534P-201ENST00000364877 106 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-1335P-201ENST00000365426 107 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-438P-201ENST00000365561 103 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 MIR1287-201ENST00000408492 90 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AL445305.1-201ENST00000432577 575 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AL596276.1-201ENST00000434465 418 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU7-34P-201ENST00000459394 64 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AC104982.1-201ENST00000478775 574 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-1225P-201ENST00000516336 65 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AC021451.1-201ENST00000523498 1129 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 MIR3136-201ENST00000583498 78 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AL513534.2-201ENST00000603836 250 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 PCMTD1P7-201ENST00000634506 357 ntBASIC0.11□□□□□ -2.39
TRAV12-3A0A0B4J271 AC090625.1-201ENST00000357130 210 ntBASIC0.1□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-37P-201ENST00000362692 107 ntBASIC0.1□□□□□ -2.39
TRAV12-3A0A0B4J271 RNU6-11P-201ENST00000364234 107 ntBASIC0.1□□□□□ -2.39
TRAV12-3A0A0B4J271 SNORA32.2-201ENST00000384049 122 ntBASIC0.1□□□□□ -2.39
TRAV12-3A0A0B4J271 RNY1P14-201ENST00000384426 108 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms