Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-36P-201ENST00000384172 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-4P-201ENST00000384205 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-5P-201ENST00000384238 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-3P-201ENST00000384314 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 SNORA25-201ENST00000384384 134 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-2-201ENST00000384627 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-9-201ENST00000384776 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-33P-201ENST00000384793 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MTCYBP2-201ENST00000407745 171 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 SNX2P2-201ENST00000424553 323 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 EEF1A1P39-201ENST00000440791 250 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 SNRPEP8-201ENST00000442866 260 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 ART2BP-201ENST00000453501 499 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AL049829.1-201ENST00000465411 156 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MTND3P5-201ENST00000512798 333 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU5A-4P-201ENST00000516588 111 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 CYCSP23-201ENST00000519781 313 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AP003168.1-201ENST00000530091 307 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR5697-201ENST00000578045 78 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR3664-201ENST00000579074 99 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AC136443.5-201ENST00000603741 370 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AL034555.1-201ENST00000604816 211 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-6P-201ENST00000606623 107 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AC012409.4-201ENST00000612923 249 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR6734-201ENST00000621166 68 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AL133216.2-202ENST00000634512 349 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AC068700.1-201ENST00000565862 3754 ntBASIC0.62□□□□□ -2.31
TRAV1-1A0A0B4J248 AC073343.1-201ENST00000328239 651 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU1-36P-201ENST00000365130 165 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-53P-201ENST00000365367 106 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 SNORA18.2-201ENST00000383865 132 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR544A-201ENST00000384855 91 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR222-201ENST00000384992 110 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AL117342.1-201ENST00000404861 406 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 EEF1A1P40-201ENST00000412883 573 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 MTCO3P41-201ENST00000414801 328 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC016550.1-201ENST00000505348 785 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 ADI1P3-201ENST00000549509 470 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC109446.2-201ENST00000567872 497 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR4661-201ENST00000582720 75 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR3136-201ENST00000583498 78 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC008752.3-201ENST00000588113 712 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC013244.3-201ENST00000605614 388 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC080013.3-201ENST00000606839 578 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-87P-201ENST00000607561 108 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 AC104073.3-201ENST00000610942 955 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 U4.7-201ENST00000638126 106 ntBASIC0.61□□□□□ -2.31
TRAV1-1A0A0B4J248 OR4G1P-203ENST00000641984 1631 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-862P-201ENST00000362804 105 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-1080P-201ENST00000383982 107 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 RPL21P1-201ENST00000399532 476 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU2-7P-201ENST00000410794 178 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 ARL5AP1-201ENST00000418991 388 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU7-51P-201ENST00000516560 62 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 SNORA31.16-201ENST00000516773 139 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC080078.3-201ENST00000605407 463 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL022345.2-201ENST00000606307 135 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL139286.2-201ENST00000606838 396 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL451064.1-201ENST00000607718 471 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL365434.2-201ENST00000607979 234 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC106858.1-201ENST00000637497 429 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AC027514.1-201ENST00000588561 1603 ntBASIC0.6□□□□□ -2.31
TRAV1-1A0A0B4J248 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms