Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL031313.1-201ENST00000448435 256 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 MTCYBP1-201ENST00000454315 1119 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 RPL18AP17-201ENST00000455326 198 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AL122001.1-201ENST00000457027 370 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 snoU109.2-201ENST00000459316 135 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AC026414.1-201ENST00000504046 698 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 MTND2P33-201ENST00000506452 1031 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU5F-2P-201ENST00000516066 82 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 MTND1P36-201ENST00000522384 936 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AC011979.2-201ENST00000527568 352 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AL157871.3-201ENST00000557231 293 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 TPRKBP2-201ENST00000565969 475 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR4452-201ENST00000583004 71 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR3136-201ENST00000583498 78 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AL356157.2-201ENST00000605122 111 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 GHRLOS.1-201ENST00000610995 70 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AC116165.2-201ENST00000616705 206 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 AL138955.1-201ENST00000622881 1040 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 Z69720.2-201ENST00000624755 279 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 PCMTD1P7-201ENST00000634506 357 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 CASC19-280ENST00000642102 1351 ntBASIC0.03□□□□□ -2.4
TRAV1-2A0A0B4J238 SNORA25.9-201ENST00000365087 128 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-744P-201ENST00000365557 107 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-701P-201ENST00000384059 107 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 U6.112-201ENST00000384129 70 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-1316P-201ENST00000384242 108 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC068533.2-201ENST00000411872 306 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU7-59P-201ENST00000459101 61 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU7-90P-201ENST00000459216 62 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC027338.1-201ENST00000514840 825 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-1223P-201ENST00000517124 104 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC091135.1-201ENST00000585943 307 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 MTND5P42-201ENST00000637720 498 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AL589743.1-201ENST00000551932 2712 ntBASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 Y_RNA.33-201ENST00000362591 102 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR936-201ENST00000401264 98 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 FCF1P10-201ENST00000407590 479 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU2-42P-201ENST00000410697 113 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNA5SP247-201ENST00000411181 105 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MTND4P20-201ENST00000424125 869 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MTCO2P1-201ENST00000424648 477 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AL603825.1-201ENST00000438481 80 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 TAF9P1-201ENST00000445421 515 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 TAF9P2-201ENST00000454958 515 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AL583843.1-201ENST00000456070 346 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU7-34P-201ENST00000459394 64 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA62.5-201ENST00000516634 120 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA59B-202ENST00000578183 701 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC025627.3-201ENST00000582078 182 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR4781-201ENST00000585250 76 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 PRELID3BP2-201ENST00000605362 201 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC006270.3-201ENST00000605967 1036 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC008147.4-201ENST00000617570 1204 ntBASIC0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA32.2-201ENST00000384049 122 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 Y_RNA.476-201ENST00000384347 108 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-163P-201ENST00000384396 106 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-1122P-201ENST00000384449 107 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 Y_RNA.623-201ENST00000411128 95 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 MTND4LP7-201ENST00000431728 294 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 MTND4P5-201ENST00000435821 1374 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 SEPT14P24-201ENST00000447236 180 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 U7.7-201ENST00000459276 60 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC104806.1-201ENST00000508720 308 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC121161.1-201ENST00000510606 652 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-1041P-201ENST00000516254 102 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNA5SP220-201ENST00000516298 104 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-914P-201ENST00000516749 109 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-922P-201ENST00000516753 99 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC090888.2-201ENST00000559765 1144 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR4431-201ENST00000579990 94 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC080078.2-201ENST00000603766 501 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 AL353149.1-201ENST00000610667 244 ntBASIC0□□□□□ -2.41
TRAV1-2A0A0B4J238 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms