Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AC124916.1-201ENST00000444020 547 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 GZMAP1-201ENST00000503054 631 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AC064836.2-201ENST00000609491 462 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 MIR6128-201ENST00000615528 109 ntBASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDK11AQ9UQ88 AC135776.4-201ENST00000624300 1904 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 MTCO2P27-201ENST00000420740 428 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 AC116337.1-201ENST00000509680 687 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 AL121821.2-201ENST00000556081 394 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 AC244517.12-201ENST00000623581 663 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 U4.7-201ENST00000638126 106 ntBASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK11AQ9UQ88 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 RNU6-78P-201ENST00000362897 107 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 RNU6-827P-201ENST00000365553 106 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 RNU6-933P-201ENST00000384424 107 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 RNU6-601P-201ENST00000384540 107 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.632-201ENST00000459189 102 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 AK3P2-201ENST00000507976 429 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 AC027176.1-201ENST00000560204 514 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 AC090574.1-201ENST00000623186 233 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 MIR7157-201ENST00000635801 60 ntBASIC4.1□□□□□ -1.75
CDK11AQ9UQ88 MTND5P30-201ENST00000452896 1731 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.58-201ENST00000362807 102 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.154-201ENST00000363624 102 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 RNY3P1-201ENST00000365085 102 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 RNU1-100P-201ENST00000365255 165 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 RNY3-201ENST00000365484 102 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 Y_RNA.490-201ENST00000384413 102 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AL117339.3-201ENST00000418733 162 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC013470.1-201ENST00000453438 462 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 PCMTD1P1-201ENST00000455560 355 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC018437.1-201ENST00000492214 406 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC116655.1-201ENST00000508324 901 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 SNORA9.3-201ENST00000516383 129 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 SNORA43.2-201ENST00000516652 128 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 RNU6-1016P-201ENST00000516689 94 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 FRG2DP-202ENST00000566967 323 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 MIR5690-201ENST00000583739 73 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC091152.3-201ENST00000604227 325 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AL121917.1-203ENST00000605534 577 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AC019193.3-201ENST00000609144 554 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 AL161423.1-201ENST00000613700 262 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDK11AQ9UQ88 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.09□□□□□ -1.76
CDK11AQ9UQ88 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 RNU6-19P-201ENST00000384718 107 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 MIR27B-201ENST00000385129 97 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AL030996.1-201ENST00000411430 235 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AL451074.5-201ENST00000415894 435 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 PTGES3P4-201ENST00000426243 356 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 MICF-203ENST00000432679 129 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AC012308.1-201ENST00000451232 178 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 U8.21-201ENST00000459536 136 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AP004217.1-201ENST00000480579 346 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AC124303.1-201ENST00000605703 360 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 uc_338.14-201ENST00000613162 166 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 AL449363.1-201ENST00000617815 186 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK11AQ9UQ88 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 AC080128.1-201ENST00000474389 1917 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 MAPK10-266ENST00000641066 6555 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 MIR147B-201ENST00000390185 80 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 SNORA3.2-201ENST00000408221 125 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 AC104389.3-201ENST00000445629 235 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 RNU7-187P-201ENST00000458985 68 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 RPL23AP49-201ENST00000492925 468 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 AC114801.2-201ENST00000503825 781 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 HMGN1P13-201ENST00000505795 138 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 SMURF2P1-201ENST00000514992 481 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms