Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 YME1L1P1-201ENST00000429435 297 ntBASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 GOT2P5-201ENST00000433995 546 ntBASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 CYCSP32-201ENST00000440548 321 ntBASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 snoU13.24-201ENST00000458998 104 ntBASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 MIR6500-201ENST00000622700 86 ntBASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.23□□□□□ -1.57
PDZRN3Q9UPQ7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RNU6-525P-201ENST00000363685 104 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 SNORD14B-201ENST00000364533 90 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 Y_RNA.281-201ENST00000364774 94 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RNU6-1286P-201ENST00000383871 107 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 MIR135A2-201ENST00000384854 100 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 MIRLET7F2-201ENST00000385277 83 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 SNORA26.5-201ENST00000391215 123 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC004552.1-201ENST00000419089 348 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 snoU109.4-201ENST00000458953 143 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RPS26P3-201ENST00000470205 348 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RPS29P19-201ENST00000479709 171 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC090543.2-201ENST00000483963 348 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC004057.1-201ENST00000485827 348 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RN7SKP43-201ENST00000516173 320 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RNU6-155P-201ENST00000516347 100 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 RNU6-781P-201ENST00000516377 101 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC090142.3-201ENST00000519012 385 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC069200.1-201ENST00000609511 323 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AL391261.4-201ENST00000616012 481 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 MIR6864-201ENST00000617935 70 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AL360181.4-201ENST00000621752 134 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AL513302.2-201ENST00000562313 1842 ntBASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDZRN3Q9UPQ7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.21□□□□□ -1.57
PDZRN3Q9UPQ7 AC009541.1-201ENST00000438279 2662 ntBASIC5.21□□□□□ -1.57
PDZRN3Q9UPQ7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PDZRN3Q9UPQ7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDZRN3Q9UPQ7 AC018529.3-201ENST00000624212 2254 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 MIR494-201ENST00000349529 81 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-1048P-201ENST00000364054 107 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.244-201ENST00000364484 109 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-1107P-201ENST00000364817 104 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.319-201ENST00000365138 92 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-1296P-201ENST00000383879 107 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-356P-201ENST00000384140 107 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 MT-TT-201ENST00000387460 66 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AL512604.1-201ENST00000404812 257 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RNA5SP104-201ENST00000410989 118 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AC069285.2-201ENST00000440210 275 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RPS26P45-201ENST00000471748 340 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 IGLVIV-53-201ENST00000520107 367 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AC018630.3-201ENST00000542637 96 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 CYP4A27P-201ENST00000567218 190 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AL450472.3-201ENST00000615578 367 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 MIR7151-201ENST00000617477 60 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 AC138915.1-201ENST00000565427 1685 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 MARK2P15-201ENST00000432204 2186 ntBASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDZRN3Q9UPQ7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 MIR412-201ENST00000362142 91 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 U8.1-201ENST00000362843 134 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.293-201ENST00000364908 93 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-969P-201ENST00000383900 105 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 SNORA51.5-201ENST00000384126 131 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 MIR1179-201ENST00000408703 91 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 ELOCP21-201ENST00000412558 336 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-377P-201ENST00000515965 102 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-970P-201ENST00000516312 107 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-412P-201ENST00000516434 106 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms