Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SNORD19.2-201ENST00000516978 73 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MIR4643-201ENST00000577473 78 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MIR5195-201ENST00000583555 115 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MIR5684-201ENST00000585074 65 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AL078605.1-201ENST00000603529 500 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 SNORD113-5-201ENST00000607261 78 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AL359198.2-201ENST00000611836 194 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 AC244205.2-202ENST00000635781 342 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42EP3Q9UKI2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 MAPK10-372ENST00000641954 3413 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.29-201ENST00000362570 113 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.65-201ENST00000362846 100 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-280P-201ENST00000364145 104 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.269-201ENST00000364685 89 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.274-201ENST00000364714 101 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-326P-201ENST00000365480 107 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA3.3-201ENST00000408712 125 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-1001P-201ENST00000411265 100 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AL139247.1-201ENST00000422768 325 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC012306.1-201ENST00000423267 114 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 HMGN2P31-201ENST00000432430 273 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SUMO1P2-201ENST00000452524 304 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 snoU13.28-201ENST00000459235 104 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC073901.1-201ENST00000462471 408 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC007215.1-201ENST00000464893 276 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RNA5SP54-201ENST00000516951 92 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SCARNA24.2-201ENST00000516968 130 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RRN3P3-201ENST00000549207 578 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 MIR5695-201ENST00000579717 85 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC091152.3-201ENST00000604227 325 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 BRDTP1-201ENST00000605735 677 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 MIR6868-201ENST00000611215 58 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC012531.5-201ENST00000611375 151 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 FTX_2.1-201ENST00000618816 94 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 AC002543.1-201ENST00000299783 1954 ntBASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.3□□□□□ -1.88
CDC42EP3Q9UKI2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.54-201ENST00000362766 105 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 HLFP1-201ENST00000402375 499 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 AL445305.1-201ENST00000432577 575 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 SNORA71B-202ENST00000439232 272 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-567P-201ENST00000516746 107 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 AC025627.2-201ENST00000576220 160 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 UBE3AP2-201ENST00000429033 2259 ntBASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDC42EP3Q9UKI2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 RNU6-626P-201ENST00000363354 107 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.200-201ENST00000364018 102 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.230-201ENST00000364348 109 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.286-201ENST00000364813 102 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 Y_RNA.570-201ENST00000384750 101 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AL390729.2-201ENST00000416137 156 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 PIGPP3-201ENST00000425307 415 ntBASIC3.28□□□□□ -1.88
CDC42EP3Q9UKI2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms