Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPL31P41-201ENST00000477967 372 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 RPL22P13-201ENST00000493291 347 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 SEM1P1-201ENST00000506694 209 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 MTCO3P13-201ENST00000577757 781 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC044792.1-201ENST00000593294 196 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC008739.2-201ENST00000597006 317 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC009541.1-201ENST00000438279 2662 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 MTND5P10-201ENST00000603719 1809 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 RNU6-1010P-201ENST00000362757 107 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 RNU6-1141P-201ENST00000364520 107 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 RPL39P29-201ENST00000447779 157 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 AP001324.2-201ENST00000461163 319 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 RPL7P42-201ENST00000481005 679 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 SCARNA11.3-201ENST00000517276 130 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 AC115990.1-201ENST00000526957 301 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 ZNF861P-201ENST00000588126 639 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL20A1Q9P218 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
COL20A1Q9P218 AL109809.4-201ENST00000603520 2185 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
COL20A1Q9P218 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL20A1Q9P218 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL20A1Q9P218 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL20A1Q9P218 AL359854.1-201ENST00000614203 1594 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-859P-201ENST00000362728 107 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-1059P-201ENST00000363752 98 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-142P-201ENST00000384019 107 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-842P-201ENST00000384269 107 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-784P-201ENST00000384330 106 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 RNU6-310P-201ENST00000384655 107 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 ARL5AP4-201ENST00000430731 512 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 RPL36AP48-201ENST00000485521 314 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 AL356055.1-201ENST00000602528 446 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
COL20A1Q9P218 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.1□□□□□ -1.91
COL20A1Q9P218 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL20A1Q9P218 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL20A1Q9P218 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 Y_RNA.123-201ENST00000363338 102 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 Y_RNA.404-201ENST00000383978 102 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 SNORA75.6-201ENST00000391318 127 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AL133475.1-201ENST00000404414 305 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 RNU2-23P-201ENST00000410545 195 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 Y_RNA.646-201ENST00000410980 101 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 RNU6-1304P-201ENST00000411374 106 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AF228730.4-201ENST00000421457 183 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC078809.1-201ENST00000427601 140 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 RPL23AP50-201ENST00000434149 455 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 AL031659.1-201ENST00000447075 539 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 RPL30P12-201ENST00000474666 353 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC016632.1-201ENST00000503994 196 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.09□□□□□ -1.91
COL20A1Q9P218 AC080078.3-201ENST00000605407 463 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 MTND5P9-201ENST00000503854 1755 ntBASIC3.09□□□□□ -1.91
COL20A1Q9P218 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL20A1Q9P218 SNORD32A-201ENST00000364805 84 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 Y_RNA.419-201ENST00000384041 102 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 RNU6-43P-201ENST00000384302 107 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 Y_RNA.473-201ENST00000384333 102 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 SNORA41-201ENST00000384675 132 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 CYCSP48-201ENST00000417124 323 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 RPL23AP95-201ENST00000426806 265 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.08□□□□□ -1.92
COL20A1Q9P218 RPS3P1-201ENST00000456781 192 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC104564.1-201ENST00000493028 407 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms