Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC093908.1-201ENST00000623125 8092 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 SNORA63.4-201ENST00000362763 126 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.245-201ENST00000364493 95 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNU5E-7P-201ENST00000365290 117 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 MIR34A-201ENST00000385130 110 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 BTF3L4P2-201ENST00000392798 346 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNA5SP120-201ENST00000410900 112 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNU2-61P-201ENST00000411069 191 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AC007919.1-201ENST00000429380 217 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 ARF4P2-201ENST00000430209 526 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AC005002.2-201ENST00000438228 269 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AC009296.1-201ENST00000443146 155 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AL049873.1-201ENST00000480540 376 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNA5SP272-201ENST00000516095 111 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNU6-1333P-201ENST00000516162 93 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNY3P16-201ENST00000516338 101 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 H3F3AP1-201ENST00000559984 334 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 SNORD113-5-201ENST00000607261 78 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 IGHVIII-44-202ENST00000636235 289 ntBASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMCD1Q9NZU5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 AC009541.1-201ENST00000438279 2662 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 RNU4-9P-201ENST00000364951 139 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 RNU6-318P-201ENST00000384283 103 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 AC115115.1-201ENST00000449927 248 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 RNU7-110P-201ENST00000516891 62 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 RNA5SP290-201ENST00000517133 127 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 AL645944.1-201ENST00000603857 493 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 ZNF826P-207ENST00000622273 1910 ntBASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
LMCD1Q9NZU5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.82-201ENST00000363000 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.92-201ENST00000363043 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.235-201ENST00000364412 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.275-201ENST00000364726 110 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.306-201ENST00000365015 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.312-201ENST00000365089 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.322-201ENST00000365151 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 MIR32-201ENST00000384965 70 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 MIR186-201ENST00000384988 86 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 MIR569-201ENST00000385228 96 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 RAB28P5-201ENST00000427490 651 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AC011742.1-201ENST00000431448 434 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.650-201ENST00000459002 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.638-201ENST00000459374 113 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AC010409.1-201ENST00000487382 476 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 RPL23AP75-201ENST00000491601 451 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 CYCTP-201ENST00000504253 315 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 MLLT10P2-201ENST00000506434 249 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 RNU6-572P-201ENST00000516724 80 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.777-201ENST00000516982 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AP004371.1-201ENST00000525240 214 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.771-201ENST00000598668 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 YPEL5P2-201ENST00000605553 359 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 MIR8057-201ENST00000620957 69 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.789-201ENST00000622480 102 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 U4.7-201ENST00000638126 106 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 AL391516.1-201ENST00000554380 2449 ntBASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
LMCD1Q9NZU5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORA25.1-201ENST00000362326 128 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-173P-201ENST00000364215 104 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU1-33P-201ENST00000364249 162 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms