Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX56Q9NY93 AC145146.1-201ENST00000496370 254 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 AC021146.2-201ENST00000504736 556 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX56Q9NY93 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX56Q9NY93 AC011494.1-201ENST00000596454 237 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX56Q9NY93 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 MTND4LP32-201ENST00000636111 270 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 AL450472.1-202ENST00000637286 180 ntBASIC3.24□□□□□ -1.89
DDX56Q9NY93 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX56Q9NY93 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX56Q9NY93 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX56Q9NY93 Y_RNA.2-201ENST00000362330 96 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 RNU4-15P-201ENST00000362613 141 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 SNORD50.1-201ENST00000362987 71 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 RNU6-1059P-201ENST00000363752 98 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 RNU1-109P-201ENST00000383960 147 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 RNU6-1274P-201ENST00000384557 107 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 UBA52P6-201ENST00000399822 382 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 MTCYBP2-201ENST00000407745 171 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 Y_RNA.594-201ENST00000410373 140 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 RN7SKP43-201ENST00000516173 320 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 APOOP3-201ENST00000536787 586 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 AC006133.1-201ENST00000617106 264 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 MIR622-201ENST00000638396 96 ntBASIC3.23□□□□□ -1.89
DDX56Q9NY93 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
DDX56Q9NY93 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DDX56Q9NY93 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC093831.2-201ENST00000624393 3427 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 U3.9-201ENST00000363823 204 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 RNU4-9P-201ENST00000364951 139 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 MIR183-201ENST00000384958 110 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 U3.19-201ENST00000390893 196 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC079354.2-201ENST00000453523 154 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 RN7SL863P-201ENST00000462370 296 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC090096.1-201ENST00000489168 390 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 SNORA67.7-201ENST00000516664 135 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 AL078605.1-201ENST00000603529 500 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC009229.3-201ENST00000608056 282 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC135507.2-201ENST00000612443 309 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC005520.5-201ENST00000613926 164 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 AC133104.2-201ENST00000615272 193 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
DDX56Q9NY93 Z82209.1-201ENST00000422141 2135 ntBASIC3.22□□□□□ -1.89
DDX56Q9NY93 ZNF299P-201ENST00000406845 1804 ntBASIC3.21□□□□□ -1.89
DDX56Q9NY93 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX56Q9NY93 RNU5B-2P-201ENST00000363036 113 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 SNORA36A-201ENST00000384221 132 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 RNU6-1297P-201ENST00000384415 104 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 MIR208B-201ENST00000401172 77 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 Y_RNA.597-201ENST00000410463 100 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 RPL19P1-201ENST00000411635 428 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 RPL21P2-201ENST00000440049 481 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 Z75741.1-201ENST00000446793 314 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC132942.1-201ENST00000486753 483 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC005741.1-201ENST00000511094 432 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 Y_RNA.670-201ENST00000516255 105 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 RNU6-1213P-201ENST00000517075 94 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 MRPS36P4-201ENST00000534436 298 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC018630.3-201ENST00000542637 96 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 MIR5696-201ENST00000578474 85 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX56Q9NY93 AP000654.2-201ENST00000605633 586 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 HMGB1P24-202ENST00000615653 685 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC018692.3-201ENST00000623929 123 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 SCARNA4-201ENST00000629045 128 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX56Q9NY93 AC006026.1-201ENST00000444025 1803 ntBASIC3.21□□□□□ -1.9
DDX56Q9NY93 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms