Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL117187.1-201ENST00000555482 181 ntBASIC3.06□□□□□ -1.92
RLIMQ9NVW2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.06□□□□□ -1.92
RLIMQ9NVW2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
RLIMQ9NVW2 RPS29P30-201ENST00000600975 111 ntBASIC3.06□□□□□ -1.92
RLIMQ9NVW2 AC016727.2-201ENST00000603988 621 ntBASIC3.06□□□□□ -1.92
RLIMQ9NVW2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.06□□□□□ -1.92
RLIMQ9NVW2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 ZNF826P-207ENST00000622273 1910 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AL356274.2-201ENST00000624379 3752 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNA5SP119-201ENST00000362715 117 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNU6-238P-201ENST00000363313 106 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNU6-529P-201ENST00000363383 104 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNU6-1285P-201ENST00000363480 105 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.144-201ENST00000363521 113 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNA5SP139-201ENST00000364340 117 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNU6-708P-201ENST00000384217 107 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 MIR490-201ENST00000384865 128 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 MIR487A-201ENST00000385009 80 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 MIR153-2-201ENST00000385225 87 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RN7SKP27-201ENST00000410684 333 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 HMGB3P2-201ENST00000411913 584 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 MTCO3P19-201ENST00000415864 321 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 USP9YP16-201ENST00000430287 407 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 USP9YP23-201ENST00000455085 407 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 U8.22-201ENST00000459141 133 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 U8.20-201ENST00000459445 131 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC022868.1-201ENST00000517767 391 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC131281.1-201ENST00000522984 164 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC115990.1-201ENST00000526957 301 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC034105.4-201ENST00000568304 277 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 MIR5571-201ENST00000577998 113 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC012493.2-201ENST00000595083 291 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AC073410.2-201ENST00000603240 332 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 Z98751.3-201ENST00000604447 521 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 AL162713.1-201ENST00000604480 262 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RNU6-91P-201ENST00000607774 107 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 RMST_6.1-201ENST00000611980 203 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 uc_338.1-201ENST00000612113 180 ntBASIC3.05□□□□□ -1.92
RLIMQ9NVW2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.40-201ENST00000362645 93 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 RNU4-56P-201ENST00000364700 142 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AP000870.1-201ENST00000472927 406 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AIG1P1-201ENST00000503376 148 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 MRPS35P2-201ENST00000508242 191 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 SNORA31.6-201ENST00000516241 130 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.715-201ENST00000517082 110 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AL450472.1-202ENST00000637286 180 ntBASIC3.04□□□□□ -1.92
RLIMQ9NVW2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.04□□□□□ -1.92
RLIMQ9NVW2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU6-1159P-201ENST00000362933 107 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.133-201ENST00000363428 110 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 SNORD115-32-201ENST00000364079 82 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU6-17P-201ENST00000384245 107 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU6-574P-201ENST00000384265 107 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU6-18P-201ENST00000384527 107 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 Y_RNA.526-201ENST00000384572 110 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RLIMQ9NVW2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.03□□□□□ -1.92
RLIMQ9NVW2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.03□□□□□ -1.92
RLIMQ9NVW2 CST9LP2-201ENST00000437612 320 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 AC110794.1-201ENST00000505816 425 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.03□□□□□ -1.92
RLIMQ9NVW2 AC074250.1-201ENST00000511117 192 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.03□□□□□ -1.92
RLIMQ9NVW2 RNU6-397P-201ENST00000516226 104 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms