Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MTCO3P40-201ENST00000392516 676 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 RPL17P50-201ENST00000396131 546 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 RNU2-16P-201ENST00000410712 136 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 RNA5SP450-201ENST00000411206 102 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 SRIP3-201ENST00000413200 219 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC078809.1-201ENST00000427601 140 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 MTATP6P26-201ENST00000445926 662 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 TPTE2P5-203ENST00000458118 728 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 SNRPGP7-201ENST00000469016 106 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 RNA5SP401-201ENST00000515920 127 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 CENPUP1-201ENST00000526649 1202 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC024909.2-201ENST00000553035 286 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 AC103705.1-201ENST00000619013 241 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZCCHC3Q9NUD5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RNU4-82P-201ENST00000362443 140 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-1085P-201ENST00000363576 107 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 SNORD32B-201ENST00000364460 84 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 XGY1-201ENST00000381172 446 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-38P-201ENST00000384085 107 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 MIR29C-201ENST00000385231 88 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA26.3-201ENST00000391119 136 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 POLHP1-201ENST00000411806 470 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AL133396.1-201ENST00000432048 687 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 MTCO2P3-201ENST00000442543 421 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-333P-201ENST00000459117 107 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 SRRM1P2-201ENST00000464531 1192 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RPL9P6-201ENST00000492764 598 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC145146.1-201ENST00000496370 254 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC107401.1-201ENST00000503426 685 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 RNU6-835P-201ENST00000516974 104 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC026464.5-201ENST00000562497 722 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AP001836.1-201ENST00000604675 523 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 AL359880.1-201ENST00000621879 266 ntBASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.98□□□□□ -2.09
ZCCHC3Q9NUD5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 SNORD14D-201ENST00000384390 87 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 RN7SKP284-201ENST00000411002 343 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AL590135.1-201ENST00000422215 156 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC019205.3-201ENST00000424573 156 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC016700.2-201ENST00000446011 156 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC245102.2-201ENST00000448956 180 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC015911.1-201ENST00000495111 156 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 ANXA2P1-201ENST00000505539 926 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 SNORA31.16-201ENST00000516773 139 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 HSPE1P4-201ENST00000550617 308 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 AL118558.2-201ENST00000556294 238 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.97□□□□□ -2.09
ZCCHC3Q9NUD5 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AC092268.1-201ENST00000342691 405 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 RNU4-20P-201ENST00000365601 151 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 CALM2P3-201ENST00000400429 449 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 MIR1294-201ENST00000408503 142 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-648P-201ENST00000410190 107 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 WARS2P1-201ENST00000429678 537 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AC091885.1-201ENST00000506658 268 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1069P-201ENST00000516612 133 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AL512310.1-201ENST00000548639 172 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 AC092747.3-201ENST00000603769 301 ntBASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms