Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AL365222.1-201ENST00000614661 98 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 AC092628.2-201ENST00000622492 339 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 SDAD1P2-201ENST00000441308 2028 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
ATG3Q9NT62 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG3Q9NT62 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ATG3Q9NT62 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ATG3Q9NT62 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
ATG3Q9NT62 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 AC009812.4-201ENST00000569134 1805 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU6-173P-201ENST00000364215 104 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU6-1130P-201ENST00000365434 107 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU6-76P-201ENST00000384060 104 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 SNORD78.2-201ENST00000391076 69 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU6-131P-201ENST00000391144 107 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU4-30P-201ENST00000410245 143 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG3Q9NT62 Z82188.1-201ENST00000436709 154 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 TOMM22P6-201ENST00000465035 409 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RPS4XP13-201ENST00000483219 789 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNA5SP341-201ENST00000516261 117 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU6-313P-201ENST00000516317 112 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 SNORA31.8-201ENST00000516327 108 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RNU2-31P-201ENST00000516954 155 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG3Q9NT62 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG3Q9NT62 AC005476.1-201ENST00000554427 397 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 H3F3AP1-201ENST00000559984 334 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 AL451007.1-201ENST00000595491 289 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 RPL23AP78-201ENST00000599928 470 ntBASIC4.38□□□□□ -1.71
ATG3Q9NT62 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG3Q9NT62 RBBP8P1-201ENST00000449447 1844 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG3Q9NT62 RNU6-222P-201ENST00000362438 107 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 Y_RNA.275-201ENST00000364726 110 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 Y_RNA.418-201ENST00000384029 102 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 RNU6-926P-201ENST00000384075 107 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 RNA5SP129-201ENST00000410276 118 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 RNU2-61P-201ENST00000411069 191 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 RPL23AP36-201ENST00000413895 458 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 AL159169.1-201ENST00000421119 127 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 PIGFP3-201ENST00000441918 722 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AL031659.1-201ENST00000447075 539 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 HMGB3P8-201ENST00000449709 577 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 Y_RNA.638-201ENST00000459374 113 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AP001324.2-201ENST00000461163 319 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 RPS26P21-201ENST00000475397 348 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC006445.1-201ENST00000491925 405 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 RNU6-62P-201ENST00000516526 102 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 Y_RNA.706-201ENST00000516933 99 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC027288.2-201ENST00000553028 243 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 AL157871.3-201ENST00000557231 293 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC090617.3-201ENST00000573670 475 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 LARP7P3-201ENST00000579888 337 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 MIR4308-201ENST00000580634 81 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AC108706.1-201ENST00000611053 297 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 AL162274.2-201ENST00000614406 332 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.37□□□□□ -1.71
ATG3Q9NT62 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG3Q9NT62 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ATG3Q9NT62 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG3Q9NT62 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG3Q9NT62 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG3Q9NT62 RNU6-428P-201ENST00000362942 107 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 SNORA80A-201ENST00000363922 136 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 Y_RNA.441-201ENST00000384123 112 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 SNORA36C-201ENST00000384289 132 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RNU6-1168P-201ENST00000390831 104 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 Y_RNA.590-201ENST00000410140 107 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RNU5E-9P-201ENST00000411164 104 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RPL21P40-201ENST00000428586 483 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AC005002.2-201ENST00000438228 269 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RPS29P31-201ENST00000446147 164 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 HMGN2P16-201ENST00000456802 261 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RPL27AP5-201ENST00000469428 449 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 UBE2DNL-203ENST00000474922 222 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AC140059.1-201ENST00000489238 361 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RNU7-175P-201ENST00000515915 61 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 MIR2355-201ENST00000517199 87 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AC026333.2-201ENST00000542164 106 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AP000787.2-201ENST00000604432 568 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AL162713.1-201ENST00000604480 262 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 AL033523.1-201ENST00000605153 153 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms