Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
CISHQ9NSE2 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 HMGB1P33-201ENST00000563485 527 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 MIR4452-201ENST00000583004 71 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC069114.2-201ENST00000604699 304 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AL158211.2-201ENST00000607282 395 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 RMST_4.1-201ENST00000616886 107 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 RMST_7.1-201ENST00000621935 268 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 OR4G3P-201ENST00000633500 913 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC095038.3-201ENST00000634439 195 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CISHQ9NSE2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 MIR499A-201ENST00000384903 122 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 RPL23AP32-201ENST00000395315 459 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 MTND1P32-201ENST00000433043 938 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 AL122001.1-201ENST00000457027 370 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 RNU5F-2P-201ENST00000516066 82 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 RNU6-276P-201ENST00000516114 96 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.79□□□□□ -2.28
CISHQ9NSE2 MTATP6P3-201ENST00000581686 676 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 AC108747.1-201ENST00000609508 535 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 AC027335.2-201ENST00000624030 375 ntBASIC0.79□□□□□ -2.28
CISHQ9NSE2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CISHQ9NSE2 RNU6-433P-201ENST00000363216 104 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 RNU6-384P-201ENST00000364900 104 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.78□□□□□ -2.28
CISHQ9NSE2 AL353777.1-201ENST00000425552 326 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.78□□□□□ -2.28
CISHQ9NSE2 EEF1A1P39-201ENST00000440791 250 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 PGBD4P5-201ENST00000445958 426 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.78□□□□□ -2.28
CISHQ9NSE2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC022447.4-201ENST00000504053 364 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 MTCO3P9-201ENST00000506989 781 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 RNU6-201P-201ENST00000517100 61 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 DEFB108E-201ENST00000524692 240 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC112187.2-201ENST00000604345 283 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC009033.1-201ENST00000624279 431 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AL445523.1-201ENST00000451184 1362 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC245060.5-201ENST00000610778 3293 ntBASIC0.78□□□□□ -2.28
CISHQ9NSE2 AC010615.1-201ENST00000594254 1764 ntBASIC0.78□□□□□ -2.29
CISHQ9NSE2 MIR340-201ENST00000362125 95 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 SNORD116.1-201ENST00000365628 92 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNU6-968P-201ENST00000384076 107 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNU6-1179P-201ENST00000384667 107 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNU2-7P-201ENST00000410794 178 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RPL22P18-201ENST00000417197 377 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 MTND1P12-201ENST00000455231 147 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 AC079140.3-201ENST00000511111 550 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNU7-51P-201ENST00000516560 62 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNU6-1003P-201ENST00000517099 105 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 RNA5SP437-201ENST00000517249 129 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 MTATP6P15-201ENST00000527233 835 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 AC090578.1-201ENST00000604955 591 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.77□□□□□ -2.29
CISHQ9NSE2 AC026585.1-201ENST00000619582 524 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
CISHQ9NSE2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC073343.1-201ENST00000328239 651 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 RNU6-78P-201ENST00000362897 107 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 MIR548B-201ENST00000385247 97 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC019070.1-201ENST00000415008 1024 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 RPS3AP37-201ENST00000419176 745 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC013410.2-201ENST00000422627 201 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC245047.4-201ENST00000433189 144 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 MTND5P2-201ENST00000442927 1142 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.76□□□□□ -2.29
CISHQ9NSE2 RPL31P3-201ENST00000458430 332 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 RNU5A-4P-201ENST00000516588 111 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.76□□□□□ -2.29
CISHQ9NSE2 ADI1P3-201ENST00000549509 470 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AL512310.8-201ENST00000550183 120 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.76□□□□□ -2.29
CISHQ9NSE2 MIR4307-201ENST00000582802 84 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AL034555.1-201ENST00000604816 211 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AP002360.4-201ENST00000606980 481 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms