Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC099513.1-201ENST00000490423 301 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC005741.1-201ENST00000511094 432 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MIR449C-201ENST00000516047 92 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-677P-201ENST00000516914 101 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC008507.2-201ENST00000588402 1176 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC011712.1-201ENST00000588959 234 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC112191.3-201ENST00000604371 277 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AL161935.2-201ENST00000414627 60 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AL591212.2-201ENST00000433923 257 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AL596276.1-201ENST00000434465 418 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AP006587.4-201ENST00000526053 529 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AC002400.1-201ENST00000569310 726 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 MIR4661-201ENST00000582720 75 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AC069114.2-201ENST00000604699 304 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 AC243829.6-201ENST00000612652 106 ntBASIC0.6□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-212P-201ENST00000362642 104 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 RNU5E-7P-201ENST00000365290 117 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-723P-201ENST00000383973 107 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 MIR194-1-201ENST00000384892 85 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 snoU13.27-201ENST00000459278 104 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AC092989.1-201ENST00000481235 277 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AC109446.1-201ENST00000566172 220 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AP000860.1-201ENST00000605250 559 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AC112220.3-201ENST00000605502 502 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AC131235.4-201ENST00000609288 620 ntBASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.59□□□□□ -2.31
KIAA1549Q9HCM3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 SNORA72.2-201ENST00000365028 127 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-716P-201ENST00000365621 103 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-968P-201ENST00000384076 107 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 SNORA40.2-201ENST00000390847 128 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 MTND4LP16-201ENST00000440828 295 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 AL512310.8-201ENST00000550183 120 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-843P-201ENST00000384454 104 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 SNORA48.1-201ENST00000390879 135 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 RPL23AP32-201ENST00000395315 459 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 PIGFP2-201ENST00000421400 651 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 AC134050.1-201ENST00000495088 933 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 AC079140.3-201ENST00000511111 550 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 Y_RNA.687-201ENST00000516558 91 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-914P-201ENST00000516749 109 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 AL356057.1-201ENST00000533798 831 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 RMST_4.1-201ENST00000616886 107 ntBASIC0.58□□□□□ -2.32
KIAA1549Q9HCM3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MIR330-201ENST00000362196 94 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 RNU4-56P-201ENST00000364700 142 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC013262.1-201ENST00000426710 252 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC027119.1-201ENST00000440877 241 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 NDUFB1P2-201ENST00000449477 176 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 snoU13.30-201ENST00000458951 104 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MIR3146-201ENST00000580367 79 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AL391001.1-201ENST00000602747 715 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC078795.2-201ENST00000602835 1252 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC007363.1-201ENST00000604736 620 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-462P-201ENST00000362659 105 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 SNORA63.3-201ENST00000362682 132 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 RPS3AP36-201ENST00000398190 775 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 MTCO3P41-201ENST00000414801 328 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 RNU2-10P-201ENST00000516375 211 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 ADI1P3-201ENST00000549509 470 ntBASIC0.57□□□□□ -2.32
KIAA1549Q9HCM3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms