Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNA5SP390-201ENST00000410191 113 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 AC244670.1-201ENST00000436879 112 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RPL39P29-201ENST00000447779 157 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU5F-8P-201ENST00000515941 111 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU2-27P-201ENST00000516185 142 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNU6-567P-201ENST00000516746 107 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 RNA5SP54-201ENST00000516951 92 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 AL391261.3-201ENST00000557194 520 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 Z83818.1-201ENST00000603584 150 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 YPEL5P2-201ENST00000605553 359 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 MIR6852-201ENST00000621699 66 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 CUL1P1-201ENST00000509510 2425 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZFYVE28Q9HCC9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 AL672296.1-201ENST00000427780 2158 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 RNU5F-3P-201ENST00000363767 117 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 RNU6-662P-201ENST00000384253 104 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 U3.26-201ENST00000391236 204 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.626-201ENST00000411288 95 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 AC099548.1-201ENST00000421443 426 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 BPY2DP-201ENST00000422208 265 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 MTCO1P5-201ENST00000433573 344 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 RBMY2UP-201ENST00000453474 324 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 AC107393.1-201ENST00000512403 346 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 RPL23AP94-201ENST00000512518 302 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 IGKV2-38-201ENST00000517443 247 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZFYVE28Q9HCC9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 MFSD8-236ENST00000641509 4050 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 RNU6-270P-201ENST00000364131 105 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 RNY4P28-201ENST00000365281 93 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 SNORA36A-201ENST00000384221 132 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.570-201ENST00000384750 101 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 MIR487A-201ENST00000385009 80 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 SNORA48.5-201ENST00000391143 135 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 PCNPP3-201ENST00000393579 471 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AP001025.1-201ENST00000486139 332 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.679-201ENST00000516416 91 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC008749.1-201ENST00000597650 306 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC006001.4-201ENST00000622243 395 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC073308.1-201ENST00000623696 305 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC007656.2-201ENST00000624902 4547 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AC110491.1-201ENST00000562191 2010 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 AL133383.2-201ENST00000622958 2336 ntBASIC4.26□□□□□ -1.73
ZFYVE28Q9HCC9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RNU6-961P-201ENST00000363893 105 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 MIR3074-201ENST00000384885 81 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 Y_RNA.590-201ENST00000410140 107 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RPL23AP36-201ENST00000413895 458 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 AC012306.1-201ENST00000423267 114 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 AC005300.1-201ENST00000428401 373 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 SNORA71B-202ENST00000439232 272 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 snoU13.6-201ENST00000458785 104 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RNA5SP310-201ENST00000459084 116 ntBASIC4.25□□□□□ -1.73
ZFYVE28Q9HCC9 RPL30P12-201ENST00000474666 353 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms