Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 RN7SKP224-201ENST00000364140 325 ntBASIC8.02□□□□□ -1.13
SENP3Q9H4L4 AC084357.1-201ENST00000473404 255 ntBASIC8.02□□□□□ -1.13
SENP3Q9H4L4 AC079598.5-201ENST00000547460 117 ntBASIC8.02□□□□□ -1.13
SENP3Q9H4L4 TCL6_3.1-201ENST00000619064 137 ntBASIC8.02□□□□□ -1.13
SENP3Q9H4L4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SENP3Q9H4L4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 MIR133B-201ENST00000362210 119 ntBASIC8.01□□□□□ -1.13
SENP3Q9H4L4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 AL512598.1-201ENST00000610158 273 ntBASIC8.01□□□□□ -1.13
SENP3Q9H4L4 AC090607.5-201ENST00000615692 224 ntBASIC8.01□□□□□ -1.13
SENP3Q9H4L4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SENP3Q9H4L4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SENP3Q9H4L4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SENP3Q9H4L4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
SENP3Q9H4L4 AC110373.1-201ENST00000505994 3505 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8□□□□□ -1.13
SENP3Q9H4L4 RN7SKP113-201ENST00000363891 295 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 RNA5SP292-201ENST00000390974 118 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 VWA8P1-201ENST00000510889 176 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 AC026402.1-201ENST00000513642 170 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 AL160290.3-201ENST00000604869 165 ntBASIC8□□□□□ -1.13
SENP3Q9H4L4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC8□□□□□ -1.13
SENP3Q9H4L4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SENP3Q9H4L4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SENP3Q9H4L4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SENP3Q9H4L4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC8□□□□□ -1.13
SENP3Q9H4L4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 PPIAP15-201ENST00000479662 484 ntBASIC7.99□□□□□ -1.13
SENP3Q9H4L4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 AC025574.2-201ENST00000615621 514 ntBASIC7.99□□□□□ -1.13
SENP3Q9H4L4 AC133552.1-201ENST00000569988 4007 ntBASIC7.99□□□□□ -1.13
SENP3Q9H4L4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SENP3Q9H4L4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 Y_RNA.12-201ENST00000362393 112 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 RNA5SP123-201ENST00000363244 119 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 SNORA25.6-201ENST00000364121 118 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 RNA5SP117-201ENST00000365294 118 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 RNU6-811P-201ENST00000384069 107 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 AL009179.1-201ENST00000406085 265 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 AC244505.4-201ENST00000434905 287 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 SSXP5-201ENST00000443473 287 ntBASIC7.98□□□□□ -1.13
SENP3Q9H4L4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.98□□□□□ -1.13
SENP3Q9H4L4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 MIR192-201ENST00000384915 110 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 RNA5SP261-201ENST00000410536 106 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 RN7SKP192-201ENST00000411291 327 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 SEM1P1-201ENST00000506694 209 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 SNORA4.4-201ENST00000515921 135 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 AC067747.1-201ENST00000608026 250 ntBASIC7.97□□□□□ -1.13
SENP3Q9H4L4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SENP3Q9H4L4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SENP3Q9H4L4 AL356489.2-201ENST00000566968 3528 ntBASIC7.96□□□□□ -1.14
SENP3Q9H4L4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms